About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032043-T1
OS493_032044-T160S RIBOSOMAL PROTEIN L34
OS493_032045-T1
OS493_032046-T1
OS493_032047-T1
OS493_032048-T1ORGANIC ANION TRANSPORTER
OS493_032050-T1MATERNAL EFFECT PROTEIN STAUFEN
OS493_032051-T1MATERNAL EFFECT PROTEIN STAUFEN
OS493_032052-T1ABHYDROLASE DOMAIN-CONTAINING PROTEIN
OS493_032053-T1VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
OS493_032054-T1TRANSCRIPTION FACTOR 7 FAMILY MEMBER
OS493_032055-T1-
OS493_032056-T1SKP1
OS493_032057-T1TRANSCRIPTION FACTOR MAF
OS493_032058-T1PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED
OS493_032059-T114-3-3 PROTEIN
OS493_032060-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_032061-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_032062-T1
OS493_032063-T1CYTOSOLIC CARBOXYPEPTIDASE
OS493_032064-T1
OS493_032065-T1PROTEIN LKAAEAR1
OS493_032066-T1U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN
OS493_032067-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_032068-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_032069-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_032070-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_032071-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_032072-T1
OS493_032073-T1
OS493_032074-T1
OS493_032075-T1
OS493_032076-T1BASIGIN RELATED
OS493_032077-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032078-T1
OS493_032079-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032080-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032081-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032082-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032083-T1
OS493_032084-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032085-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032086-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_032088-T1CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
OS493_032089-T1
OS493_032090-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_032091-T1
OS493_032092-T1PROPERDIN
OS493_032093-T1NOTCH LIGAND FAMILY MEMBER
OS493_032094-T1
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