About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029642-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_029643-T1CALCIUM BINDING PROTEIN
LLU|FUN_029644-T1TETRASPANIN
LLU|FUN_029645-T1SERINE/THREONINE-PROTEIN KINASE DOA-RELATED
LLU|FUN_029646-T1
LLU|FUN_029647-T1
LLU|FUN_029648-T139S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL
LLU|FUN_029649-T1ZINC FINGER PROTEIN
LLU|FUN_029650-T1
LLU|FUN_029651-T1
LLU|FUN_029652-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_029653-T1
LLU|FUN_029654-T1
LLU|FUN_029655-T1
LLU|FUN_029656-T1
LLU|FUN_029657-T1FUKUTIN RELATED PROTEIN
LLU|FUN_029658-T1
LLU|FUN_029659-T1
LLU|FUN_029660-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
LLU|FUN_029661-T1
LLU|FUN_029662-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_029663-T1TOLL-LIKE RECEPTOR
LLU|FUN_029664-T1
LLU|FUN_029665-T1
LLU|FUN_029666-T1-
LLU|FUN_029667-T1
LLU|FUN_029668-T1THO COMPLEX SUBUNIT 3 THO3
LLU|FUN_029669-T1FIBROBLAST GROWTH FACTOR RECEPTOR
LLU|FUN_029670-T1CONTACTIN 5
LLU|FUN_029671-T1
LLU|FUN_029672-T1
LLU|FUN_029673-T1PROTEIN CBG03580
LLU|FUN_029674-T1
LLU|FUN_029675-T1
LLU|FUN_029676-T1
LLU|FUN_029677-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_029678-T1DYNEIN 2 LIGHT INTERMEDIATE CHAIN, ISOFORM 2
LLU|FUN_029679-T1KIF1-BINDING PROTEIN
LLU|FUN_029680-T1NUMB
LLU|FUN_029681-T1
LLU|FUN_029682-T1
LLU|FUN_029683-T1GABA-B RECEPTOR
LLU|FUN_029684-T1
LLU|FUN_029685-T1
LLU|FUN_029686-T1GUANYLYL CYCLASE
LLU|FUN_029687-T1GUANYLYL CYCLASE
LLU|FUN_029688-T1GUANYLYL CYCLASE
LLU|FUN_029689-T1
LLU|FUN_029690-T1
LLU|FUN_029691-T1
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