About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029692-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_029693-T1
LLU|FUN_029694-T1PHD FINGER PROTEIN
LLU|FUN_029695-T1SUPEROXIDE DISMUTASE CU-ZN -RELATED
LLU|FUN_029696-T1
LLU|FUN_029697-T1
LLU|FUN_029698-T1
LLU|FUN_029699-T1
LLU|FUN_029700-T1
LLU|FUN_029701-T1CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED
LLU|FUN_029702-T1
LLU|FUN_029703-T1CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED
LLU|FUN_029704-T1
LLU|FUN_029705-T1
LLU|FUN_029706-T1TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER
LLU|FUN_029707-T1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
LLU|FUN_029708-T1PROTEIN CBG15099
LLU|FUN_029709-T1
LLU|FUN_029710-T1OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC
LLU|FUN_029711-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_029712-T1DOPAMINE BETA HYDROXYLASE RELATED
LLU|FUN_029713-T1
LLU|FUN_029714-T1
LLU|FUN_029715-T1
LLU|FUN_029716-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_029717-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_029718-T1TRANSLATION ELONGATION FACTOR-RELATED
LLU|FUN_029719-T1
LLU|FUN_029720-T1O-ACYLTRANSFERASE
LLU|FUN_029721-T1
LLU|FUN_029722-T1
LLU|FUN_029723-T1
LLU|FUN_029724-T1
LLU|FUN_029725-T1
LLU|FUN_029726-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_029727-T1
LLU|FUN_029728-T1AGAP011099-PA
LLU|FUN_029729-T1RETROTRANSPOSON
LLU|FUN_029730-T1
LLU|FUN_029731-T1PEPTIDYLPROLYL ISOMERASE
LLU|FUN_029732-T1ACIREDUCTONE DIOXYGENASE
LLU|FUN_029733-T1ACIREDUCTONE DIOXYGENASE
LLU|FUN_029734-T1
LLU|FUN_029735-T1RETINOVIN-RELATED
LLU|FUN_029736-T1UNCHARACTERIZED
LLU|FUN_029737-T1
LLU|FUN_029738-T1
LLU|FUN_029739-T1
LLU|FUN_029740-T1
LLU|FUN_029741-T1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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