About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_003000-T1
OS493_003001-T1LIPASE MATURATION FACTOR
OS493_003002-T1ENOYL-COA HYDRATASE-RELATED
OS493_003003-T1LIPASE MATURATION FACTOR
OS493_003004-T1ENOYL-COA HYDRATASE-RELATED
OS493_003005-T1LIPASE MATURATION FACTOR
OS493_003006-T1
OS493_003007-T1
OS493_003009-T1LIPASE MATURATION FACTOR
OS493_003010-T1LIPASE MATURATION FACTOR
OS493_003011-T1
OS493_003012-T1LIPASE MATURATION FACTOR
OS493_003013-T1ENOYL-COA HYDRATASE-RELATED
OS493_003014-T1LIPASE MATURATION FACTOR
OS493_003015-T1ENOYL-COA HYDRATASE-RELATED
OS493_003016-T1POLYCYSTIN FAMILY MEMBER
OS493_003017-T1POLYCYSTIN-1
OS493_003018-T1POLYCYSTIN-1
OS493_003019-T1RNA DEMETHYLASE ALKBH5
OS493_003020-T1NEUROLIGIN
OS493_003021-T1CARBOXYLESTERASE
OS493_003022-T1MYOSIN
OS493_003023-T1MYOSIN
OS493_003024-T1MYOSIN VII, XV
OS493_003025-T1
OS493_003026-T1
OS493_003027-T1
OS493_003028-T1MYOSIN VII, XV
OS493_003029-T1
OS493_003030-T1
OS493_003031-T1MYOSIN VII, XV
OS493_003032-T1
OS493_003033-T1
OS493_003034-T1TRANSMEMBRANE CHANNEL-RELATED
OS493_003035-T1TRANSMEMBRANE CHANNEL-RELATED
OS493_003036-T1
OS493_003037-T1
OS493_003038-T1POLYCYSTIN-1
OS493_003039-T1POLYCYSTIN FAMILY MEMBER
OS493_003040-T1POLYCYSTIN FAMILY MEMBER
OS493_003041-T1
OS493_003042-T1
OS493_003043-T1
OS493_003044-T1MYOSIN
OS493_003045-T1LIPOXYGENASE
OS493_003046-T1LIPOXYGENASE
OS493_003047-T1LIPOXYGENASE
OS493_003048-T1
OS493_003051-T1RNA-BINDING PROTEIN
OS493_003053-T1MONOCARBOXYLATE TRANSPORTER
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