About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_003112-T1ANOCTAMIN
OS493_003113-T1ANOCTAMIN
OS493_003114-T1ANOCTAMIN
OS493_003115-T1ANOCTAMIN
OS493_003116-T1ANOCTAMIN
OS493_003117-T1ANOCTAMIN
OS493_003118-T1ANOCTAMIN
OS493_003119-T1ANOCTAMIN
OS493_003120-T1ANOCTAMIN
OS493_003121-T1ANOCTAMIN
OS493_003122-T1ANOCTAMIN
OS493_003123-T1ANOCTAMIN
OS493_003124-T1
OS493_003125-T1ANOCTAMIN
OS493_003126-T1ANOCTAMIN
OS493_003127-T1ANOCTAMIN
OS493_003128-T1ANOCTAMIN
OS493_003129-T1ANOCTAMIN
OS493_003130-T1ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV
OS493_003131-T1
OS493_003132-T1
OS493_003133-T1
OS493_003134-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_003135-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_003136-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_003137-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003138-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_003139-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
OS493_003140-T1
OS493_003141-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
OS493_003142-T1
OS493_003143-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
OS493_003144-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_003145-T1
OS493_003146-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
OS493_003148-T1PORCUPINE
OS493_003149-T1PORCUPINE
OS493_003151-T1ZINC/IRON TRANSPORTER
OS493_003152-T1G PROTEIN-COUPLED RECEPTOR
OS493_003153-T1CASEIN KINASE-RELATED
OS493_003154-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_003155-T1
OS493_003156-T1COPROPORPHYRINIGEN III OXIDASE
OS493_003157-T1HISTONE-LYSINE N-METHYLTRANSFERASE SMYD
OS493_003158-T1SODIUM/CALCIUM EXCHANGER
OS493_003159-T1SODIUM/CALCIUM EXCHANGER
OS493_003160-T1SODIUM/CALCIUM EXCHANGER
OS493_003161-T1
OS493_003162-T1
OS493_003163-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
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