About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_003164-T1
OS493_003165-T1ENDOCHITINASE
OS493_003166-T1
OS493_003167-T1
OS493_003168-T1
OS493_003169-T1
OS493_003170-T1ALR/ERV
OS493_003173-T1LEUCOKININ RECEPTOR-RELATED
OS493_003174-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003175-T1
OS493_003176-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003177-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003178-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003179-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003180-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003181-T1
OS493_003182-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003183-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003184-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_003185-T1SERINE/THREONINE PROTEIN PHOSPHATASE
OS493_003186-T1UNCHARACTERIZED
OS493_003187-T1
OS493_003188-T1METEORIN-LIKE PROTEIN
OS493_003189-T1DIACYLGLYCEROL KINASE
OS493_003190-T1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
OS493_003191-T1RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
OS493_003192-T1
OS493_003193-T1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
OS493_003194-T1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
OS493_003195-T1
OS493_003196-T1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
OS493_003197-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
OS493_003198-T1
OS493_003199-T1ESOPHAGEAL CANCER ASSOCIATED PROTEIN
OS493_003200-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_003201-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_003202-T1
OS493_003203-T1
OS493_003204-T1
OS493_003205-T1
OS493_003206-T1
OS493_003207-T1
OS493_003208-T1WD40 REPEAT PROTEIN
OS493_003209-T1UNCHARACTERIZED
OS493_003210-T1THYMIDINE KINASE
OS493_003211-T1CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED
OS493_003212-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_003213-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_003214-T1DYNEIN HEAVY CHAIN
OS493_003215-T1DYNEIN HEAVY CHAIN
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