About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 50 51 52 53 54 55 56 57 58 59 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_002950-T1POLYCYSTIN FAMILY MEMBER
OS493_002951-T1POLYCYSTIN-1
OS493_002952-T1
OS493_002953-T1DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
OS493_002954-T1
OS493_002955-T1DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
OS493_002956-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
OS493_002957-T1SPERIOLIN-BINDING FACTOR
OS493_002958-T1SPERIOLIN-BINDING FACTOR
OS493_002959-T1SPERIOLIN-BINDING FACTOR
OS493_002960-T1ADP RIBOSYLATION FACTOR-RELATED
OS493_002961-T1PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
OS493_002962-T1COENZYME Q10 BIOSYNTHESIS PROTEIN 7
OS493_002963-T1
OS493_002964-T1CENTROMERE PROTEIN X
OS493_002965-T1ZINC FINGER PROTEIN 207
OS493_002966-T1CGTHBA PROTEIN -14 GENE PROTEIN
OS493_002967-T1
OS493_002968-T1
OS493_002969-T1
OS493_002970-T1E3 UBIQUITIN-PROTEIN LIGASE CHIP
OS493_002971-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_002972-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_002973-T1G-PROTEIN COUPLED RECEPTOR
OS493_002974-T1CENTROCORTIN FAMILY MEMBER
OS493_002975-T1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
OS493_002976-T139S RIBOSOMAL PROTEIN L12
OS493_002977-T1UPF0472 PROTEIN C16ORF72
OS493_002978-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_002979-T1ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
OS493_002980-T1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
OS493_002981-T1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
OS493_002982-T1TRANSLATION FACTOR
OS493_002983-T1XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED
OS493_002984-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
OS493_002985-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_002986-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_002987-T1
OS493_002988-T1MATRIX METALLOPROTEINASE
OS493_002989-T1MATRIX METALLOPROTEINASE
OS493_002990-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_002991-T1PROTEIN SIDEKICK
OS493_002992-T1PROTEIN SIDEKICK
OS493_002993-T1TWEETY-RELATED
OS493_002994-T1
OS493_002995-T1
OS493_002996-T1
OS493_002997-T1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
OS493_002998-T1C2 DOMAIN-CONTAINING PROTEIN
OS493_002999-T1CYTOSOLIC PHOSPHOLIPASE A2
TOP