About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_028007-T1ETS
LLU|FUN_028008-T1
LLU|FUN_028009-T1ETS
LLU|FUN_028010-T1
LLU|FUN_028011-T1
LLU|FUN_028012-T1
LLU|FUN_028013-T1
LLU|FUN_028014-T1
LLU|FUN_028015-T1
LLU|FUN_028016-T1PHOSPHATASE, ORPHAN 1, 2
LLU|FUN_028017-T1
LLU|FUN_028018-T1PHOSPHATASE, ORPHAN 1, 2
LLU|FUN_028019-T1FORMATE DEHYDROGENASE 1
LLU|FUN_028020-T1STEROL O-ACYLTRANSFERASE
LLU|FUN_028021-T1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
LLU|FUN_028022-T1ABC TRANSPORTER B FAMILY
LLU|FUN_028023-T1
LLU|FUN_028024-T1ATP-BINDING CASSETTE SUB-FAMILY B
LLU|FUN_028025-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_028026-T1
LLU|FUN_028027-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_028028-T1
LLU|FUN_028029-T1REPLICATION PROTEIN A3
LLU|FUN_028030-T1WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBER
LLU|FUN_028031-T1
LLU|FUN_028032-T1BCL-2 RELATED
LLU|FUN_028033-T1RNA-BINDING PROTEIN 33
LLU|FUN_028034-T1
LLU|FUN_028035-T1
LLU|FUN_028036-T1
LLU|FUN_028037-T1
LLU|FUN_028038-T1ANTIBIOTIC RESISTANCE PROTEIN MCBG
LLU|FUN_028039-T1
LLU|FUN_028040-T1
LLU|FUN_028041-T1
LLU|FUN_028042-T1ADP-RIBOSYLGLYCOHYDROLASE
LLU|FUN_028043-T1PHEROMONE SHUTDOWN PROTEIN
LLU|FUN_028044-T1PROTEIN CBG13728
LLU|FUN_028045-T1
LLU|FUN_028046-T1
LLU|FUN_028047-T1
LLU|FUN_028048-T1
LLU|FUN_028049-T1PROTEIN CBG13728
LLU|FUN_028050-T1
LLU|FUN_028051-T1
LLU|FUN_028052-T1
LLU|FUN_028053-T1
LLU|FUN_028054-T1
LLU|FUN_028055-T1DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED
LLU|FUN_028056-T1UNCHARACTERIZED
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