About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_027755-T1AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
LLU|FUN_027756-T1
LLU|FUN_027757-T1
LLU|FUN_027758-T1
LLU|FUN_027759-T1UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER
LLU|FUN_027760-T1UBIQUILIN
LLU|FUN_027761-T1DNA POLYMERASE SUBUNIT GAMMA-1
LLU|FUN_027762-T1
LLU|FUN_027763-T1ALKALINE CERAMIDASE
LLU|FUN_027764-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
LLU|FUN_027765-T1
LLU|FUN_027766-T1
LLU|FUN_027767-T1
LLU|FUN_027768-T1
LLU|FUN_027769-T1
LLU|FUN_027770-T1
LLU|FUN_027771-T1
LLU|FUN_027772-T1
LLU|FUN_027773-T1
LLU|FUN_027774-T1
LLU|FUN_027775-T1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
LLU|FUN_027776-T1JNK/SAPK-ASSOCIATED PROTEIN
LLU|FUN_027777-T1
LLU|FUN_027778-T1UBIQUITIN LIGASE PROTEIN CHFR
LLU|FUN_027779-T1
LLU|FUN_027780-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_027781-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_027782-T1COMPLEMENT COMPONENT 1
LLU|FUN_027783-T1
LLU|FUN_027784-T1ZINC FINGER, CCHC DOMAIN CONTAINING 8
LLU|FUN_027785-T1UNCHARACTERIZED
LLU|FUN_027786-T1
LLU|FUN_027787-T1MOLTING PROTEIN MLT-4
LLU|FUN_027788-T1ZINC FINGER PROTEIN
LLU|FUN_027789-T1
LLU|FUN_027790-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_027791-T1GAMETOGENETIN-BINDING PROTEIN 2
LLU|FUN_027792-T1
LLU|FUN_027793-T1
LLU|FUN_027794-T1
LLU|FUN_027795-T114-3-3 PROTEIN
LLU|FUN_027796-T1
LLU|FUN_027797-T1RIBOSOMAL RNA METHYLTRANSFERASE
LLU|FUN_027798-T1EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED
LLU|FUN_027799-T1EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED
LLU|FUN_027800-T1
LLU|FUN_027801-T1
LLU|FUN_027802-T1
LLU|FUN_027803-T1
LLU|FUN_027804-T1
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