About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_027855-T1
LLU|FUN_027856-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
LLU|FUN_027857-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
LLU|FUN_027858-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_027859-T1
LLU|FUN_027860-T1
LLU|FUN_027861-T1
LLU|FUN_027862-T1
LLU|FUN_027863-T1
LLU|FUN_027864-T1TOLL-LIKE RECEPTOR
LLU|FUN_027865-T1CAMK FAMILY PROTEIN KINASE
LLU|FUN_027866-T1BICD FAMILY-LIKE CARGO ADAPTER
LLU|FUN_027867-T1
LLU|FUN_027868-T1ENOYL-COA HYDRATASE-RELATED
LLU|FUN_027869-T1WD REPEAT-CONTAINING PROTEIN 55
LLU|FUN_027870-T1
LLU|FUN_027871-T1
LLU|FUN_027872-T1OS05G0310600 PROTEIN
LLU|FUN_027873-T1UNCHARACTERIZED
LLU|FUN_027874-T1PROTEIN CBG12054-RELATED
LLU|FUN_027875-T1
LLU|FUN_027876-T1-
LLU|FUN_027877-T1
LLU|FUN_027878-T1
LLU|FUN_027879-T1
LLU|FUN_027880-T1
LLU|FUN_027881-T1KELCH PROTEIN
LLU|FUN_027882-T1LD33804P
LLU|FUN_027883-T1
LLU|FUN_027884-T1
LLU|FUN_027885-T1LD33804P
LLU|FUN_027886-T1
LLU|FUN_027887-T1
LLU|FUN_027888-T1
LLU|FUN_027889-T1
LLU|FUN_027890-T1
LLU|FUN_027891-T1
LLU|FUN_027892-T1
LLU|FUN_027893-T1GLYCOSYLTRANSFERASE
LLU|FUN_027894-T1SYNAPTIC VESICLE MEMBRANE PROTEIN VAT-1 HOMOLOG-LIKE
LLU|FUN_027895-T1
LLU|FUN_027896-T1GLUCOSE-6-PHOSPHATE ISOMERASE
LLU|FUN_027897-T1
LLU|FUN_027898-T1TWISTED GASTRULATION PROTEIN HOMOLOG 1-A-RELATED
LLU|FUN_027899-T1ZINC FINGER, RING/FYVE/PHD-TYPE
LLU|FUN_027900-T1SODIUM/HYDROGEN EXCHANGER
LLU|FUN_027901-T1
LLU|FUN_027902-T1
LLU|FUN_027903-T1
LLU|FUN_027904-T1RAS-RELATED PROTEIN RAB
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