About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_57631-0.3
Bpl_scaf_57633-0.1IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57634-0.1TRANSMEMBRANE PROTEIN 79
Bpl_scaf_57637-0.0
Bpl_scaf_57643-0.0SERINE-THREONINE PROTEIN KINASE
Bpl_scaf_57644-0.3IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57645-0.8PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_57646-0.2
Bpl_scaf_57647-0.13COLLAGEN ALPHA
Bpl_scaf_57647-0.14COLLAGEN ALPHA
Bpl_scaf_57648-0.6LEUCYL-TRNA SYNTHETASE
Bpl_scaf_57654-0.0SACSIN
Bpl_scaf_57654-0.1SACSIN
Bpl_scaf_5766-0.1
Bpl_scaf_5766-0.4RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_57663-0.0
Bpl_scaf_57665-0.1PROTEIN KINASE PKN/PRK1, EFFECTOR
Bpl_scaf_57666-0.6
Bpl_scaf_57667-0.3PX DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57667-0.4
Bpl_scaf_57668-0.10TRANSPOSON
Bpl_scaf_57669-0.3
Bpl_scaf_57670-0.8
Bpl_scaf_57670-0.9GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Bpl_scaf_57670-1.1
Bpl_scaf_57670-1.10GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Bpl_scaf_57670-1.8
Bpl_scaf_57670-2.11
Bpl_scaf_57670-2.13
Bpl_scaf_57670-2.14
Bpl_scaf_57670-3.0
Bpl_scaf_57670-3.12GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_57670-3.18
Bpl_scaf_57670-3.19
Bpl_scaf_57670-3.24GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_57701-0.0
Bpl_scaf_57711-0.0
Bpl_scaf_57711-0.4
Bpl_scaf_57711-0.6GM2 GANGLIOSIDE ACTIVATOR PROTEIN
Bpl_scaf_57711-1.3
Bpl_scaf_57711-1.4P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
Bpl_scaf_57711-2.3EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE
Bpl_scaf_57711-3.2PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
Bpl_scaf_57711-4.16
Bpl_scaf_57711-4.17
Bpl_scaf_57711-4.18
Bpl_scaf_57711-4.6FOUR-JOINTED BOX PROTEIN 1
Bpl_scaf_57712-0.4TRANSGELIN
Bpl_scaf_57724-1.13PYRUVATE DEHYDROGENASE KINASE
Bpl_scaf_57724-1.14BARDET-BIEDL SYNDROME 7 PROTEIN
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