About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_57850-0.2SKP1
Bpl_scaf_57850-0.3SKP1
Bpl_scaf_57850-0.4E3 UBIQUITIN-PROTEIN LIGASE SIAH2
Bpl_scaf_57855-0.12SULFOTRANSFERASE SULT
Bpl_scaf_57855-0.2
Bpl_scaf_57855-0.5SULFOTRANSFERASE SULT
Bpl_scaf_57855-0.6
Bpl_scaf_57855-0.9SULFOTRANSFERASE SULT
Bpl_scaf_57861-0.2CEREBELLIN-RELATED
Bpl_scaf_57861-0.3CEREBELLIN-RELATED
Bpl_scaf_57877-0.0NEUROPEPTIDES RECEPTOR
Bpl_scaf_57883-0.14MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_57883-0.6MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_57893-0.22FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_57893-0.24FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_57893-0.41FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_57911-0.6COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Bpl_scaf_57911-0.8
Bpl_scaf_57916-0.0
Bpl_scaf_57926-0.0
Bpl_scaf_57926-0.2
Bpl_scaf_57926-0.5
Bpl_scaf_5794-0.2INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_57943-0.10FATTY ACID ACYL TRANSFERASE-RELATED
Bpl_scaf_57943-0.12
Bpl_scaf_57943-0.6LIPID PHOSPHATE PHOSPHATASE
Bpl_scaf_57953-0.3
Bpl_scaf_57953-0.7
Bpl_scaf_57953-0.8
Bpl_scaf_57954-0.2
Bpl_scaf_57954-0.5
Bpl_scaf_57954-1.5NATTERIN-4
Bpl_scaf_57954-2.10CEREBELLIN-RELATED
Bpl_scaf_57954-2.34
Bpl_scaf_57954-2.35CEREBELLIN-RELATED
Bpl_scaf_57954-2.7MIP08469P
Bpl_scaf_57954-2.9CEREBELLIN-RELATED
Bpl_scaf_57954-4.10ALPHA-MANNOSIDASE
Bpl_scaf_57954-4.11ALPHA-MANNOSIDASE
Bpl_scaf_57954-4.9
Bpl_scaf_57954-5.1UNCHARACTERIZED
Bpl_scaf_57954-5.23
Bpl_scaf_57954-5.26ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Bpl_scaf_57954-5.39UNCHARACTERIZED
Bpl_scaf_57968-0.13
Bpl_scaf_57968-0.15SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Bpl_scaf_57968-0.19EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57968-0.24
Bpl_scaf_57968-0.26REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57976-0.13COLLAGEN ALPHA
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