About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_57424-4.7
Bpl_scaf_57424-4.8UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_57424-5.10IP22168P
Bpl_scaf_57424-5.12
Bpl_scaf_57424-5.29
Bpl_scaf_57424-5.6L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_57424-6.1FRIZZLED
Bpl_scaf_57424-7.0TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4
Bpl_scaf_57424-7.8ACTIN
Bpl_scaf_57425-0.11
Bpl_scaf_57425-0.7RAS-LIKE FAMILY MEMBER 11
Bpl_scaf_57425-1.10ANKYRIN REPEAT-CONTAINING
Bpl_scaf_57425-1.17
Bpl_scaf_57425-1.5
Bpl_scaf_57425-1.7POTE ANKYRIN DOMAIN
Bpl_scaf_57436-1.11SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_57436-1.16
Bpl_scaf_57440-0.0
Bpl_scaf_57444-0.3PURPLE ACID PHOSPHATASE
Bpl_scaf_57445-0.13
Bpl_scaf_57445-0.19
Bpl_scaf_57445-0.20CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
Bpl_scaf_57445-0.941-2 PROTEIN ANTIGEN-RELATED
Bpl_scaf_57445-1.12MULTIPLE PDZ DOMAIN PROTEIN
Bpl_scaf_57445-1.19GLUTATHIONE PEROXIDASE
Bpl_scaf_57445-1.20LD30288P
Bpl_scaf_57445-1.30
Bpl_scaf_57445-1.31MULTIPLE PDZ DOMAIN PROTEIN
Bpl_scaf_57445-1.32SELENOPROTEIN P
Bpl_scaf_57445-1.33TRANSMEMBRANE PROTEIN 234
Bpl_scaf_57454-0.12DESMOGLEIN FAMILY MEMBER
Bpl_scaf_57454-0.13
Bpl_scaf_57454-1.14STEROL DESATURASE
Bpl_scaf_57454-1.15
Bpl_scaf_57454-1.17DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_57454-1.18ALPHA-AMYLASE FAMILY MEMBER
Bpl_scaf_57454-1.24
Bpl_scaf_57454-1.27
Bpl_scaf_57454-1.7APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57454-1.9
Bpl_scaf_57462-0.5PARANEOPLASTIC ANTIGEN
Bpl_scaf_57462-1.13GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_57462-1.14SULFOTRANSFERASE SULT
Bpl_scaf_57462-1.16UNCHARACTERIZED
Bpl_scaf_57463-0.0
Bpl_scaf_57463-0.1
Bpl_scaf_57471-0.7HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
Bpl_scaf_57471-1.0
Bpl_scaf_57471-1.17
Bpl_scaf_57478-0.4
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