About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_57248-2.8ZGC:174356
Bpl_scaf_57248-3.13
Bpl_scaf_57248-3.16SIDESTEP PROTEIN
Bpl_scaf_57248-3.17SIDESTEP PROTEIN
Bpl_scaf_57248-3.8
Bpl_scaf_57248-4.5IONOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_57248-4.8GRAM DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_57248-4.9GRAM DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_57248-5.12
Bpl_scaf_57248-5.13DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_57248-5.24
Bpl_scaf_57248-5.28
Bpl_scaf_57248-5.41UNCHARACTERIZED
Bpl_scaf_57248-5.43TRANSMEMBRANE PROTEIN 168
Bpl_scaf_57248-5.9
Bpl_scaf_57251-0.24MOLTING PROTEIN MLT-4
Bpl_scaf_57251-0.25
Bpl_scaf_57251-0.5ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12
Bpl_scaf_57259-0.1CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_57259-1.0CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_57259-2.13WD40 REPEAT PROTEIN
Bpl_scaf_57259-2.14PROTEIN TORNADO 1
Bpl_scaf_57259-2.8
Bpl_scaf_57259-3.12LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Bpl_scaf_57259-3.18UNCHARACTERIZED
Bpl_scaf_57259-3.19GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5
Bpl_scaf_57259-3.21UNCHARACTERIZED
Bpl_scaf_57259-5.12
Bpl_scaf_57259-5.15OPSIN
Bpl_scaf_57259-5.3LAMIN DM0-RELATED
Bpl_scaf_57265-0.0SACSIN
Bpl_scaf_57265-0.1SACSIN
Bpl_scaf_5728-0.5ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_57280-0.3
Bpl_scaf_57280-0.5
Bpl_scaf_57280-0.7
Bpl_scaf_57291-0.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_57301-0.5COLLAGEN ALPHA
Bpl_scaf_57309-0.4
Bpl_scaf_57319-0.15INTEGRIN ALPHA
Bpl_scaf_57319-0.16INTEGRIN ALPHA
Bpl_scaf_57319-0.7BONUS, ISOFORM C-RELATED
Bpl_scaf_57331-0.10XK-RELATED PROTEIN
Bpl_scaf_57331-0.12
Bpl_scaf_57331-0.13PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN
Bpl_scaf_57331-0.20L-THREONINE 3-DEHYDROGENASE
Bpl_scaf_57332-0.1
Bpl_scaf_57332-0.7
Bpl_scaf_57332-0.8LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_57332-1.1
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