About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_57120-9.3SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_57125-0.10SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Bpl_scaf_57125-0.9SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Bpl_scaf_57151-0.2GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_5717-0.13REGULATOR-RELATED
Bpl_scaf_5717-0.8
Bpl_scaf_57177-0.3
Bpl_scaf_57177-0.7CEREBELLIN-RELATED
Bpl_scaf_57177-0.8
Bpl_scaf_57180-0.0
Bpl_scaf_57198-0.10
Bpl_scaf_57198-0.8CEREBRAL PROTEIN-11-RELATED
Bpl_scaf_57203-0.11
Bpl_scaf_57203-0.12RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_57203-0.13MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Bpl_scaf_57203-0.3
Bpl_scaf_57211-0.3KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
Bpl_scaf_57211-0.5MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_57215-0.3CENTROSOMAL PROTEIN OF 85 KDA
Bpl_scaf_57222-0.10INHIBITOR OF APOPTOSIS
Bpl_scaf_57222-0.12ZINC FINGER PROTEIN
Bpl_scaf_57223-1.6
Bpl_scaf_57223-1.7BARDET-BIEDL SYNDROME 12 PROTEIN
Bpl_scaf_57223-1.8BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_57223-2.6TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_57223-2.9GRANULIN
Bpl_scaf_57223-3.11THYROTROPH EMBRYONIC FACTOR RELATED
Bpl_scaf_57223-3.12
Bpl_scaf_57223-3.15
Bpl_scaf_57223-3.26
Bpl_scaf_57223-4.40RHO FAMILY GTPASE
Bpl_scaf_57223-4.41USP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_57223-4.9METALLOPROTEASE
Bpl_scaf_57223-5.10UBIQUITIN-ACTIVATING ENZYME E1
Bpl_scaf_57223-5.11
Bpl_scaf_57223-5.6
Bpl_scaf_57224-0.2
Bpl_scaf_57224-0.5UNCHARACTERIZED
Bpl_scaf_57233-0.7FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_57233-0.8FIBRINOGEN ALPHA CHAIN
Bpl_scaf_57247-0.10VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_57247-0.12TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_57248-0.12
Bpl_scaf_57248-0.13
Bpl_scaf_57248-1.24
Bpl_scaf_57248-1.25
Bpl_scaf_57248-1.26
Bpl_scaf_57248-1.27
Bpl_scaf_57248-1.28THAP DOMAIN PROTEIN
Bpl_scaf_57248-2.10ZGC:174356
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