About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_56777-3.15G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_56777-3.4UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN
Bpl_scaf_56777-4.0
Bpl_scaf_56777-5.3
Bpl_scaf_56777-5.7ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
Bpl_scaf_56777-5.9
Bpl_scaf_56777-6.3NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_56777-7.5ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_56777-7.9
Bpl_scaf_56778-0.1EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Bpl_scaf_56778-0.11
Bpl_scaf_56778-0.12EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Bpl_scaf_56778-0.13MYOSIN LIGHT CHAIN 1, 3
Bpl_scaf_56778-0.16FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_5678-0.0
Bpl_scaf_56787-0.13
Bpl_scaf_56787-0.22
Bpl_scaf_56787-0.24
Bpl_scaf_56787-0.27
Bpl_scaf_56795-0.17
Bpl_scaf_56795-0.19BAX INHIBITOR-RELATED
Bpl_scaf_56795-0.20CYTOCHROME P450 508A4-RELATED
Bpl_scaf_56795-0.35
Bpl_scaf_56795-0.4
Bpl_scaf_56795-0.40
Bpl_scaf_56804-0.10CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_56804-0.15
Bpl_scaf_56804-1.6PUTATIVE-RELATED
Bpl_scaf_56804-1.7SIDESTEP PROTEIN
Bpl_scaf_56813-0.0ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_56813-0.2HISTONE DEACETYLASE HDAC1-RELATED
Bpl_scaf_56813-1.0HISTONE DEACETYLASE 9-RELATED
Bpl_scaf_56822-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_56822-0.7
Bpl_scaf_56822-1.1
Bpl_scaf_56822-1.12
Bpl_scaf_56822-1.8
Bpl_scaf_56823-0.2COPINE FAMILY PROTEIN 1
Bpl_scaf_56823-0.4BETA-AMYLOID BINDING PROTEIN-RELATED
Bpl_scaf_56823-1.22
Bpl_scaf_56823-1.25METALLOPHOSPHOESTERASE
Bpl_scaf_56823-1.38
Bpl_scaf_56823-1.39
Bpl_scaf_56823-1.43
Bpl_scaf_56823-1.44
Bpl_scaf_56823-1.46
Bpl_scaf_56823-1.47
Bpl_scaf_56823-1.9
Bpl_scaf_56833-1.34MYOTROPHIN
Bpl_scaf_56833-1.5
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