About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_56370-0.0
Bpl_scaf_56372-0.2
Bpl_scaf_56374-0.5
Bpl_scaf_56375-0.11ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_56375-0.56ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_56375-1.4INTEGRIN ALPHA
Bpl_scaf_56375-2.4
Bpl_scaf_56375-2.5SEMAPHORIN
Bpl_scaf_56375-3.8
Bpl_scaf_56376-0.1
Bpl_scaf_56376-0.2
Bpl_scaf_56409-0.2POLYCYSTIN-1
Bpl_scaf_56410-0.11
Bpl_scaf_56410-0.7FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_56410-1.12WD REPEAT-CONTAINING PROTEIN 97
Bpl_scaf_56410-1.13SULFOQUINOVOSIDASE
Bpl_scaf_56410-1.16
Bpl_scaf_56410-1.19WD REPEAT-CONTAINING PROTEIN 97
Bpl_scaf_56410-1.20WD REPEAT-CONTAINING PROTEIN 97
Bpl_scaf_56410-2.24PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_56410-2.4PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_56410-3.7
Bpl_scaf_56410-3.8ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4
Bpl_scaf_56410-4.10MICROTUBULE-ASSOCIATED PROTEIN 9
Bpl_scaf_56410-4.2PROTEIN KISH-A
Bpl_scaf_56410-4.9RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
Bpl_scaf_56419-0.8
Bpl_scaf_56428-0.11
Bpl_scaf_56449-0.5
Bpl_scaf_56449-0.7
Bpl_scaf_5646-0.0
Bpl_scaf_56460-0.6FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_56460-0.7THAP DOMAIN-CONTAINING
Bpl_scaf_56471-0.0
Bpl_scaf_56471-0.3CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_56473-0.7UNCHARACTERIZED
Bpl_scaf_56485-0.2CEREBELLIN-RELATED
Bpl_scaf_56485-0.3
Bpl_scaf_56485-0.6CEREBELLIN-RELATED
Bpl_scaf_56496-0.0
Bpl_scaf_56498-0.10EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_5651-0.2
Bpl_scaf_56526-0.1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_56540-0.10
Bpl_scaf_56540-0.11
Bpl_scaf_56540-0.3
Bpl_scaf_56540-0.6CEREBELLIN-RELATED
Bpl_scaf_56540-0.9
Bpl_scaf_56554-0.13
Bpl_scaf_56554-0.2
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