About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_028982-T1ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
OS493_028983-T1SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
OS493_028984-T1RAD50
OS493_028985-T1MOLTING PROTEIN MLT-4
OS493_028986-T1
OS493_028987-T1
OS493_028988-T1ANKYRIN REPEAT PROTEIN
OS493_028989-T1RGD1565685 PROTEIN
OS493_028990-T1SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
OS493_028991-T1SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
OS493_028992-T1NIBAN FAMILY MEMBER
OS493_028994-T1
OS493_028995-T1PROTEIN VAV
OS493_028996-T1PROTEIN VAV
OS493_028997-T1ACROSIN-RELATED
OS493_028998-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_028999-T1
OS493_029000-T1
OS493_029001-T1
OS493_029002-T1
OS493_029003-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_029004-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_029005-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
OS493_029006-T1MULTICOPPER OXIDASE-RELATED
OS493_029007-T1
OS493_029008-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_029009-T1
OS493_029010-T1
OS493_029011-T1
OS493_029012-T1
OS493_029013-T1
OS493_029014-T1
OS493_029016-T1
OS493_029017-T1
OS493_029018-T1
OS493_029020-T1
OS493_029021-T1
OS493_029022-T1
OS493_029023-T1
OS493_029024-T1
OS493_029025-T1
OS493_029026-T1
OS493_029027-T1
OS493_029028-T1
OS493_029029-T1
OS493_029030-T1
OS493_029031-T1
OS493_029032-T1
OS493_029033-T1
OS493_029034-T1
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