About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_028710-T1CENTROSOMAL PROTEIN 2
OS493_028711-T1CENTROSOMAL PROTEIN 2
OS493_028712-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_028713-T1CENTROSOMAL PROTEIN 2
OS493_028714-T1
OS493_028715-T1CENTROSOMAL PROTEIN 2
OS493_028716-T1
OS493_028717-T1CENTROSOMAL PROTEIN 2
OS493_028718-T1CENTROSOMAL PROTEIN 2
OS493_028719-T1CENTROSOMAL PROTEIN 2
OS493_028720-T1CENTROSOMAL PROTEIN 2
OS493_028721-T1CENTROSOMAL PROTEIN 2
OS493_028722-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_028723-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12
OS493_028724-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_028725-T1
OS493_028726-T1
OS493_028727-T1DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A
OS493_028728-T1
OS493_028729-T1CHONDROITIN SYNTHASE
OS493_028730-T1CHONDROITIN SYNTHASE
OS493_028731-T1CYTOCHROME P450 FAMILY 46 SUBFAMILY A
OS493_028732-T1
OS493_028733-T1P53 INDUCED PROTEIN
OS493_028734-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_028735-T1ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
OS493_028736-T1ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
OS493_028737-T1HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
OS493_028738-T1
OS493_028739-T1UNCHARACTERIZED
OS493_028740-T1CBL
OS493_028742-T1CBL
OS493_028743-T1NUCLEOSIDE DIPHOSPHATE KINASE 7
OS493_028744-T1
OS493_028745-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT
OS493_028746-T1SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2
OS493_028747-T1
OS493_028748-T1
OS493_028749-T1RETINOBLASTOMA-BINDING PROTEIN 5
OS493_028750-T1
OS493_028751-T1
OS493_028752-T1
OS493_028753-T1
OS493_028754-T1
OS493_028755-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_028756-T1INTERFERON-INDUCED PROTEIN 44
OS493_028757-T1CONNEXIN
OS493_028758-T1
OS493_028759-T1INTERFERON-INDUCED PROTEIN 44
OS493_028760-T1
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