About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_028540-T1
OS493_028541-T1
OS493_028542-T1
OS493_028543-T1
OS493_028544-T1
OS493_028545-T1
OS493_028546-T1
OS493_028548-T1
OS493_028549-T1
OS493_028550-T1DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
OS493_028551-T1DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
OS493_028552-T1
OS493_028553-T1COLLAGEN ALPHA
OS493_028555-T1
OS493_028556-T1PROTEIN ABHD14B-LIKE
OS493_028557-T1RAN BINDING PROTEIN
OS493_028558-T1PHD FINGER PROTEIN
OS493_028559-T1TESTIS-EXPRESSED PROTEIN 52
OS493_028560-T1KU AUTOANTIGEN DNA HELICASE
OS493_028562-T1
OS493_028563-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_028564-T1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
OS493_028565-T1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
OS493_028566-T1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
OS493_028567-T1
OS493_028568-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_028569-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_028570-T1IMPORTIN-7, 8, 11
OS493_028571-T1IMPORTIN-7, 8, 11
OS493_028572-T1
OS493_028573-T1
OS493_028575-T1
OS493_028576-T1PROPERDIN
OS493_028577-T1
OS493_028578-T1
OS493_028579-T1
OS493_028580-T1
OS493_028581-T1
OS493_028582-T1
OS493_028583-T1N-ACETYLTRANSFERASE 10
OS493_028586-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
OS493_028587-T1OPSIN
OS493_028588-T1PROTEIN LIN-7 HOMOLOG
OS493_028589-T1YEAST SPT2-RELATED
OS493_028590-T1
OS493_028591-T1GH10160P
OS493_028593-T1
OS493_028594-T1
OS493_028595-T1
OS493_028596-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
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