About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 521 522 523 524 525 526 527 528 529 530 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_028323-T1ESSS SUBUNIT OF NADH:UBIQUINONE OXIDOREDUCTASE (COMPLEX I) PROTEIN
OS493_028324-T1SERINE/THREONINE-PROTEIN KINASE
OS493_028325-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_028326-T1
OS493_028327-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12
OS493_028328-T1
OS493_028329-T1
OS493_028330-T1
OS493_028331-T1NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
OS493_028332-T1MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2
OS493_028333-T1
OS493_028334-T1CYTOCHROME P450 FAMILY 3
OS493_028335-T1CYTOCHROME P450 FAMILY 3
OS493_028336-T1GREB1-RELATED
OS493_028337-T1GREB1-RELATED
OS493_028338-T1CYTOCHROME P450 FAMILY 3
OS493_028339-T1PENICILLIN-BINDING PROTEIN
OS493_028340-T1PENICILLIN-BINDING PROTEIN
OS493_028341-T1PENICILLIN-BINDING PROTEIN
OS493_028342-T1AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR
OS493_028343-T1
OS493_028344-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
OS493_028345-T1
OS493_028346-T1
OS493_028347-T1TYROSINASE FAMILY MEMBER
OS493_028348-T1
OS493_028349-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_028350-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_028351-T1TYROSINASE FAMILY MEMBER
OS493_028352-T1
OS493_028354-T1
OS493_028355-T1INHIBITOR OF GROWTH PROTEIN
OS493_028356-T1
OS493_028357-T1
OS493_028358-T1
OS493_028359-T1
OS493_028360-T1PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN
OS493_028361-T1MONOCARBOXYLATE TRANSPORTER
OS493_028362-T1MONOCARBOXYLATE TRANSPORTER
OS493_028364-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_028366-T1E3 UFM1-PROTEIN LIGASE 1
OS493_028367-T1E3 UFM1-PROTEIN LIGASE 1
OS493_028368-T1BUD13 HOMOLOG
OS493_028369-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028370-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028371-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028372-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028373-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028374-T1
OS493_028375-T1
TOP