About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_028376-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028377-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028378-T1
OS493_028379-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028380-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028381-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_028382-T1CRYPTOCHROME
OS493_028383-T1FERREDOXIN/ADRENODOXIN
OS493_028384-T1GLYCOPROTEIN INTEGRAL MEMBRANE PROTEIN 1
OS493_028386-T1
OS493_028387-T1GUANYL-NUCLEOTIDE EXCHANGE FACTOR
OS493_028389-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_028390-T1REGULATION OF ENOLASE PROTEIN 1
OS493_028391-T1
OS493_028392-T1NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1
OS493_028394-T1
OS493_028395-T1NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1
OS493_028396-T1
OS493_028397-T1DNA EXCISION REPAIR PROTEIN ERCC-8
OS493_028399-T1
OS493_028400-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
OS493_028401-T1
OS493_028402-T1
OS493_028403-T1
OS493_028405-T1KINESIN-LIKE PROTEIN KLP-3
OS493_028406-T1KINESIN-LIKE PROTEIN KLP-3
OS493_028407-T1
OS493_028408-T1
OS493_028410-T1CAAX PRENYL PROTEASE 1
OS493_028411-T1G-PROTEIN COUPLED RECEPTOR
OS493_028412-T1G-PROTEIN COUPLED RECEPTOR
OS493_028413-T1
OS493_028414-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_028415-T1
OS493_028416-T1UNNAMED PRODUCT
OS493_028417-T1
OS493_028418-T1
OS493_028419-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_028420-T1
OS493_028421-T1HELICASE
OS493_028422-T1INTEGRAL MEMBRANE PROTEIN GPR177
OS493_028423-T1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
OS493_028424-T1PHOSPHATIDYLINOSITOL KINASE
OS493_028425-T1
OS493_028426-T1
OS493_028427-T1
OS493_028428-T1
OS493_028429-T1
OS493_028430-T1
OS493_028431-T1RADIAL SPOKE HEAD 1 HOMOLOG
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