About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 516 517 518 519 520 521 522 523 524 525 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_028040-T1TETRATRICOPEPTIDE REPEAT PROTEIN 19
OS493_028041-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
OS493_028042-T1INTEGRIN ALPHA
OS493_028043-T1INTEGRIN ALPHA
OS493_028044-T1WD40 REPEAT PF20
OS493_028045-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_028046-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_028047-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_028048-T1
OS493_028049-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
OS493_028052-T1
OS493_028053-T1INTEGRIN ALPHA
OS493_028054-T1INTEGRIN ALPHA
OS493_028055-T1INTEGRIN ALPHA
OS493_028056-T1INTEGRIN ALPHA
OS493_028057-T1INTEGRIN ALPHA
OS493_028058-T1ATP-DEPENDENT RNA HELICASE
OS493_028061-T1TRANSLATION ELONGATION FACTOR-RELATED
OS493_028062-T1
OS493_028063-T1
OS493_028064-T1
OS493_028065-T1
OS493_028066-T1
OS493_028070-T1
OS493_028071-T1CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
OS493_028072-T1
OS493_028073-T1
OS493_028074-T1
OS493_028075-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028076-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028077-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028078-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028079-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028080-T1
OS493_028081-T1
OS493_028082-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028083-T1PROTEIN CBG23806
OS493_028084-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028085-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_028086-T1
OS493_028087-T1
OS493_028088-T1
OS493_028089-T1
OS493_028090-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_028091-T1PROTEIN SIDEKICK
OS493_028092-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_028093-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_028094-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_028095-T1TYROSINE-PROTEIN KINASE
OS493_028096-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
TOP