About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_027880-T1G-PROTEIN COUPLED RECEPTOR
OS493_027881-T1
OS493_027882-T1
OS493_027883-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_027884-T1INTELECTIN
OS493_027885-T1UNCHARACTERIZED
OS493_027886-T1UNCHARACTERIZED
OS493_027887-T1UNCHARACTERIZED
OS493_027888-T1UNCHARACTERIZED
OS493_027889-T1
OS493_027890-T1
OS493_027891-T1UNCHARACTERIZED
OS493_027892-T1
OS493_027893-T1
OS493_027894-T1
OS493_027895-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_027896-T1
OS493_027897-T1INTELECTIN
OS493_027898-T1INTELECTIN
OS493_027899-T1
OS493_027900-T1
OS493_027901-T1HOMEOBOX PROTEIN NKX
OS493_027902-T1CADHERIN-23
OS493_027903-T1PIKACHURIN-LIKE PROTEIN
OS493_027904-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_027905-T1
OS493_027906-T1PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4
OS493_027907-T1CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA
OS493_027908-T1BAX INHIBITOR-RELATED
OS493_027909-T1PPP4R2-RELATED PROTEIN
OS493_027910-T1-
OS493_027911-T1HOMEOBOX PROTEIN NKX
OS493_027912-T1HOMEOBOX PROTEIN ARISTALESS
OS493_027913-T1INTELECTIN
OS493_027914-T1INTELECTIN
OS493_027915-T1INTELECTIN
OS493_027916-T1INTELECTIN
OS493_027917-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_027918-T1INTELECTIN
OS493_027919-T1HOMEOBOX PROTEIN NKX
OS493_027920-T1ACTIN
OS493_027921-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027922-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027923-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027924-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027925-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027926-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027927-T1NNMT/PNMT/TEMT FAMILY MEMBER
OS493_027928-T1LEUCOKININ RECEPTOR-RELATED
OS493_027931-T1ATP-BINDING CASSETTE SUB-FAMILY C
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