About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_027568-T1DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
OS493_027569-T1DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
OS493_027570-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_027571-T1SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
OS493_027572-T1SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
OS493_027573-T1METALLOPROTEASE M41 FTSH
OS493_027574-T1TELOMERE-ASSOCIATED PROTEIN RIF1
OS493_027575-T1ABC TRANSPORTER B FAMILY
OS493_027576-T1ABC TRANSPORTER B FAMILY
OS493_027577-T1ABC TRANSPORTER B FAMILY
OS493_027578-T1
OS493_027579-T1
OS493_027580-T1
OS493_027581-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027582-T1
OS493_027583-T1
OS493_027584-T1
OS493_027585-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027586-T1
OS493_027587-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027588-T1
OS493_027589-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027590-T1
OS493_027591-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027592-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027593-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027594-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_027595-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027596-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027597-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_027598-T1
OS493_027599-T1
OS493_027600-T1ASPARTOACYLASE
OS493_027601-T1HYPOTHETICAL PROTEIN LOC691189
OS493_027602-T1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
OS493_027604-T1
OS493_027605-T1PA14 DOMAIN-CONTAINING PROTEIN
OS493_027606-T1PENTRAXIN
OS493_027607-T1
OS493_027608-T1
OS493_027609-T1
OS493_027610-T1THO COMPLEX SUBUNIT 3 THO3
OS493_027611-T1MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
OS493_027613-T1MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
OS493_027615-T1PENTRAXIN
OS493_027616-T1LUNG SEVEN TRANSMEMBRANE RECEPTOR
OS493_027617-T1
OS493_027618-T1
OS493_027619-T1
OS493_027620-T1UNCHARACTERIZED
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