About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_027297-T1OTU DOMAIN CONTAINING PROTEIN
OS493_027298-T1
OS493_027299-T1
OS493_027300-T1PROBABLE MEMBRANE PROTEIN DUF221-RELATED
OS493_027301-T1PROBABLE MEMBRANE PROTEIN DUF221-RELATED
OS493_027302-T1
OS493_027303-T1PROBABLE MEMBRANE PROTEIN DUF221-RELATED
OS493_027304-T1PROBABLE MEMBRANE PROTEIN DUF221-RELATED
OS493_027305-T1NEUROLIGIN
OS493_027306-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_027307-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_027312-T1
OS493_027313-T1
OS493_027314-T1
OS493_027315-T1
OS493_027316-T1GLUTAREDOXIN 2
OS493_027317-T1
OS493_027318-T1
OS493_027319-T1
OS493_027320-T1AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B
OS493_027321-T1
OS493_027322-T1
OS493_027323-T1
OS493_027324-T1UNCHARACTERIZED
OS493_027325-T1
OS493_027326-T1AF4/FMR2 FAMILY MEMBER
OS493_027327-T1AF4/FMR2 FAMILY MEMBER
OS493_027328-T1RING BOX
OS493_027329-T1-
OS493_027330-T1-
OS493_027331-T1-
OS493_027332-T1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
OS493_027333-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_027334-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_027335-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_027336-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_027337-T1
OS493_027338-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_027339-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_027340-T1
OS493_027341-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 158
OS493_027342-T1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
OS493_027343-T1
OS493_027344-T1
OS493_027345-T1
OS493_027346-T1G PROTEIN-COUPLED RECEPTOR-RELATED
OS493_027347-T1G PROTEIN-COUPLED RECEPTOR-RELATED
OS493_027348-T1G PROTEIN-COUPLED RECEPTOR-RELATED
OS493_027349-T1OVOCHYMASE-RELATED
OS493_027350-T1
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