About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_027189-T1ACYL-COENZYME A THIOESTERASE-RELATED
OS493_027190-T1ACYL-COENZYME A THIOESTERASE-RELATED
OS493_027191-T1
OS493_027192-T1
OS493_027193-T1BARDET-BIEDL SYNDROME 2 PROTEIN
OS493_027194-T1BARDET-BIEDL SYNDROME 2 PROTEIN
OS493_027195-T1BARDET-BIEDL SYNDROME 2 PROTEIN
OS493_027196-T1
OS493_027197-T1ACYL-COENZYME A THIOESTERASE-RELATED
OS493_027198-T1FARNESYL-PYROPHOSPHATE SYNTHETASE
OS493_027199-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027200-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027201-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027202-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027203-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027204-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027205-T1
OS493_027206-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027207-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027208-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027209-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027210-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027211-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_027212-T1PROTEIN KINASE PKN/PRK1, EFFECTOR
OS493_027213-T1PROTEIN KINASE PKN/PRK1, EFFECTOR
OS493_027214-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_027215-T1OVOCHYMASE-RELATED
OS493_027216-T1OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC
OS493_027217-T1
OS493_027218-T1
OS493_027219-T1
OS493_027220-T1
OS493_027221-T1PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT
OS493_027222-T1LEPRECAN 1
OS493_027223-T16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
OS493_027224-T1IP21249P
OS493_027225-T160S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
OS493_027226-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
OS493_027228-T1
OS493_027229-T1
OS493_027230-T1
OS493_027231-T1
OS493_027232-T1GEO13361P1-RELATED
OS493_027233-T1
OS493_027234-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_027235-T1
OS493_027236-T1
OS493_027237-T1
OS493_027238-T1
OS493_027242-T1FRIZZLED
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