About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_027075-T1
OS493_027076-T1TUMOR NECROSIS FACTOR RECEPTOR
OS493_027077-T1
OS493_027078-T1
OS493_027079-T1
OS493_027080-T1
OS493_027081-T1
OS493_027082-T1TNFR-CYS DOMAIN-CONTAINING PROTEIN
OS493_027083-T1
OS493_027084-T1
OS493_027085-T1
OS493_027086-T1
OS493_027087-T1
OS493_027088-T1
OS493_027089-T1
OS493_027091-T1
OS493_027092-T1
OS493_027093-T1
OS493_027094-T1
OS493_027095-T1
OS493_027096-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_027097-T1
OS493_027098-T1
OS493_027099-T1FI01459P
OS493_027100-T1
OS493_027101-T1PRE-MRNA CLEAVAGE COMPLEX II
OS493_027102-T1
OS493_027103-T1
OS493_027104-T1
OS493_027105-T1
OS493_027110-T1
OS493_027111-T1
OS493_027112-T1PROTEIN DR1
OS493_027113-T1
OS493_027114-T1
OS493_027115-T1PROTEIN SIDEKICK
OS493_027116-T1PROTEIN SIDEKICK
OS493_027117-T1
OS493_027118-T1
OS493_027119-T1
OS493_027120-T1
OS493_027121-T1
OS493_027122-T1PROTEIN SIDEKICK
OS493_027123-T1
OS493_027124-T1
OS493_027126-T1PROTEIN SIDEKICK
OS493_027127-T1CYTOKINE RECEPTOR
OS493_027128-T1
OS493_027129-T1MULTICOPPER OXIDASE-RELATED
OS493_027131-T1-
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