About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_026867-T1EQUILIBRATIVE NUCLEOSIDE TRANSPORTER
OS493_026868-T1
OS493_026869-T1
OS493_026870-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026871-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026872-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026873-T1
OS493_026874-T1
OS493_026875-T1
OS493_026876-T1ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043
OS493_026877-T1DEATH DOMAIN-CONTAINING PROTEIN
OS493_026878-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026879-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026880-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026881-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026882-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026883-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026884-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026885-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026886-T1
OS493_026887-T1
OS493_026888-T1
OS493_026889-T1
OS493_026890-T1UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
OS493_026891-T1MEDIATOR COMPLEX SUBUNIT
OS493_026892-T1MEDIATOR COMPLEX SUBUNIT
OS493_026893-T1MEDIATOR COMPLEX SUBUNIT
OS493_026894-T1
OS493_026895-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_026896-T1
OS493_026897-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_026898-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026899-T1
OS493_026900-T1
OS493_026901-T1
OS493_026902-T1PROLINE-RICH, LACRIMAL 1
OS493_026903-T1
OS493_026904-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026905-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026906-T1
OS493_026907-T1
OS493_026908-T1ANGIOTENSIN-CONVERTING ENZYME
OS493_026909-T1
OS493_026910-T1
OS493_026911-T1
OS493_026912-T1
OS493_026913-T1UBX DOMAIN-CONTAINING PROTEIN 4
OS493_026914-T1
OS493_026915-T1
OS493_026916-T1TNF RECEPTOR ASSOCIATED FACTOR
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