About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_026711-T1
OS493_026712-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_026713-T1
OS493_026714-T1
OS493_026715-T1
OS493_026716-T1
OS493_026717-T1CENTROSOMAL PROTEIN OF 112 KDA
OS493_026718-T1CENTROSOMAL PROTEIN OF 112 KDA
OS493_026719-T1
OS493_026720-T1FATTY ACID SYNTHASE
OS493_026721-T1UNCHARACTERIZED
OS493_026722-T1P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN
OS493_026723-T1DED DOMAIN-CONTAINING PROTEIN
OS493_026724-T1
OS493_026725-T1
OS493_026726-T1
OS493_026727-T1
OS493_026728-T1
OS493_026730-T1
OS493_026731-T1PROTEIN ENHANCER OF SEVENLESS 2B
OS493_026732-T1POLYCYSTIN FAMILY MEMBER
OS493_026733-T1POLYCYSTIN FAMILY MEMBER
OS493_026734-T1
OS493_026735-T1MULTICOPPER OXIDASE-RELATED
OS493_026736-T1
OS493_026738-T1MULTICOPPER OXIDASE-RELATED
OS493_026739-T1POLYCYSTIN-1
OS493_026740-T1
OS493_026741-T1POLYCYSTIN FAMILY MEMBER
OS493_026742-T1POLYCYSTIN FAMILY MEMBER
OS493_026743-T1POLYCYSTIN FAMILY MEMBER
OS493_026744-T1PROTEIN FAM227B
OS493_026745-T1KELCH DOMAIN-CONTAINING PROTEIN 9
OS493_026746-T1
OS493_026747-T1UNCHARACTERIZED
OS493_026748-T1UNCHARACTERIZED
OS493_026749-T1UNCHARACTERIZED
OS493_026750-T1
OS493_026751-T1
OS493_026752-T1
OS493_026753-T1TRIHELIX TRANSCRIPTION FACTOR ASIL2
OS493_026754-T1
OS493_026755-T1
OS493_026756-T1MOLTING PROTEIN MLT-4
OS493_026757-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_026758-T180 KDA MCM3-ASSOCIATED PROTEIN
OS493_026759-T1
OS493_026760-T1FIBRILLIN-RELATED
OS493_026761-T1
OS493_026762-T1FIBRILLIN-RELATED
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