About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_028654-T1ANTHRAX TOXIN RECEPTOR
OS493_028655-T1
OS493_028656-T1
OS493_028657-T1ACYL-COA DEHYDROGENASE
OS493_028662-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_028663-T1EG:EG0003.4 PROTEIN-RELATED
OS493_028664-T1G-PROTEIN COUPLED RECEPTOR
OS493_028665-T1LEUCOKININ RECEPTOR-RELATED
OS493_028666-T1LEUCOKININ RECEPTOR-RELATED
OS493_028667-T1LEUCOKININ RECEPTOR-RELATED
OS493_028668-T1
OS493_028669-T1
OS493_028670-T1
OS493_028671-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028672-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028673-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028674-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028675-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028676-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_028677-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028678-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028679-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028680-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_028681-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_028682-T1CHOLESTEROL OXIDASE
OS493_028683-T1CHOLESTEROL OXIDASE
OS493_028684-T1CHOLESTEROL OXIDASE
OS493_028685-T1UDP-2,3-DIACYLGLUCOSAMINE HYDROLASE-RELATED
OS493_028686-T1CHOLESTEROL OXIDASE
OS493_028687-T1LEUCOKININ RECEPTOR-RELATED
OS493_028688-T1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
OS493_028689-T1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
OS493_028690-T1
OS493_028691-T1POTE ANKYRIN DOMAIN
OS493_028693-T1CALPAIN
OS493_028694-T1CALPAIN
OS493_028695-T1
OS493_028696-T1
OS493_028698-T1
OS493_028699-T1CHOLESTEROL OXIDASE
OS493_028700-T1CHOLESTEROL OXIDASE
OS493_028701-T1
OS493_028702-T1DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A
OS493_028703-T1WNT RELATED
OS493_028704-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_028705-T1
OS493_028706-T1UNCHARACTERIZED
OS493_028707-T1INOSITOL POLYPHOSPHATE KINASE
OS493_028708-T1INOSITOL POLYPHOSPHATE KINASE
OS493_028709-T1OPSIN
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