About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_029035-T1
OS493_029036-T1
OS493_029037-T1
OS493_029038-T1
OS493_029039-T1
OS493_029040-T1
OS493_029041-T1
OS493_029042-T1
OS493_029043-T1
OS493_029044-T1
OS493_029045-T1
OS493_029046-T1
OS493_029047-T1
OS493_029048-T1
OS493_029049-T1
OS493_029050-T1
OS493_029051-T1
OS493_029052-T1
OS493_029053-T1
OS493_029054-T1
OS493_029055-T1
OS493_029056-T1
OS493_029057-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
OS493_029058-T1
OS493_029059-T1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
OS493_029060-T1
OS493_029061-T1
OS493_029062-T1CONSORTIN
OS493_029063-T1N-MYC DOWNSTREAM REGULATED
OS493_029064-T1ZYGIN
OS493_029065-T1N-ALPHA-ACETYLTRANSFERASE 30
OS493_029066-T1
OS493_029067-T1
OS493_029068-T1
OS493_029069-T1POLYCOMB GROUP PROTEIN
OS493_029070-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 7
OS493_029071-T1MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED
OS493_029072-T1NOP SEVEN ASSOCIATED PROTEIN 1
OS493_029073-T1
OS493_029074-T1
OS493_029075-T1
OS493_029076-T1
OS493_029077-T1
OS493_029078-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_029080-T1
OS493_029081-T1
OS493_029082-T1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
OS493_029083-T1
OS493_029084-T1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
OS493_029085-T1
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