About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_025839-T1UNCHARACTERIZED
LLU|FUN_025840-T1ANKYRIN REPEAT CONTAINING
LLU|FUN_025841-T1ANKYRIN REPEAT CONTAINING
LLU|FUN_025842-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_025843-T1
LLU|FUN_025844-T1
LLU|FUN_025845-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_025846-T1
LLU|FUN_025847-T1
LLU|FUN_025848-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_025849-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_025850-T1
LLU|FUN_025851-T1
LLU|FUN_025852-T1
LLU|FUN_025853-T1
LLU|FUN_025855-T1
LLU|FUN_025856-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_025857-T1MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
LLU|FUN_025858-T1TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT A
LLU|FUN_025859-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11
LLU|FUN_025860-T1PEPTIDYLPROLYL ISOMERASE
LLU|FUN_025861-T1
LLU|FUN_025862-T1
LLU|FUN_025863-T1
LLU|FUN_025864-T1
LLU|FUN_025865-T1FOS TRANSCRIPTION FACTOR-RELATED
LLU|FUN_025866-T1FOS TRANSCRIPTION FACTOR-RELATED
LLU|FUN_025867-T1
LLU|FUN_025868-T1
LLU|FUN_025869-T1
LLU|FUN_025870-T1
LLU|FUN_025871-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_025872-T1OPSIN
LLU|FUN_025873-T1OPSIN
LLU|FUN_025874-T1
LLU|FUN_025875-T1
LLU|FUN_025876-T1
LLU|FUN_025877-T1OS05G0310600 PROTEIN
LLU|FUN_025878-T1XANTHINE DEHYDROGENASE
LLU|FUN_025879-T1XANTHINE DEHYDROGENASE
LLU|FUN_025880-T1XANTHINE DEHYDROGENASE
LLU|FUN_025881-T1
LLU|FUN_025882-T1
LLU|FUN_025883-T1
LLU|FUN_025884-T1
LLU|FUN_025885-T1
LLU|FUN_025886-T1
LLU|FUN_025887-T1
LLU|FUN_025888-T1PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
LLU|FUN_025889-T1ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED
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