About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_025637-T1
LLU|FUN_025638-T1RIBOSOMAL PROTEIN L23-RELATED
LLU|FUN_025639-T1NUCLEOPORIN NUP37 P37 -RELATED
LLU|FUN_025640-T1GI:13385330
LLU|FUN_025641-T1TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED
LLU|FUN_025642-T1RUNT RELATED
LLU|FUN_025643-T1GUANYL-NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_025644-T1XAA-PRO AMINOPEPTIDASE 1
LLU|FUN_025645-T1INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG
LLU|FUN_025646-T1AFADIN
LLU|FUN_025647-T1
LLU|FUN_025648-T1TANDEM PH DOMAIN CONTAINING PROTEIN
LLU|FUN_025649-T1
LLU|FUN_025650-T1
LLU|FUN_025651-T1
LLU|FUN_025652-T1
LLU|FUN_025653-T1
LLU|FUN_025654-T1
LLU|FUN_025655-T1
LLU|FUN_025656-T1
LLU|FUN_025657-T1
LLU|FUN_025658-T1
LLU|FUN_025659-T1
LLU|FUN_025660-T1
LLU|FUN_025661-T1
LLU|FUN_025662-T1
LLU|FUN_025663-T1SH2-SH3 ADAPTOR PROTEIN-RELATED
LLU|FUN_025664-T1CYTOKINE RECEPTOR
LLU|FUN_025665-T1PROTEIN BRICK1
LLU|FUN_025666-T1
LLU|FUN_025667-T1
LLU|FUN_025668-T1
LLU|FUN_025669-T1INTERLEUKIN-27 SUBUNIT BETA
LLU|FUN_025670-T1TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
LLU|FUN_025671-T1TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
LLU|FUN_025672-T1CYTOKINE RECEPTOR
LLU|FUN_025673-T1
LLU|FUN_025674-T1TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
LLU|FUN_025675-T1
LLU|FUN_025676-T1
LLU|FUN_025677-T1
LLU|FUN_025678-T1
LLU|FUN_025679-T1
LLU|FUN_025680-T1
LLU|FUN_025681-T1
LLU|FUN_025682-T1
LLU|FUN_025683-T1
LLU|FUN_025684-T1PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE
LLU|FUN_025685-T1
LLU|FUN_025686-T1THREONINE-TRNA LIGASE
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