About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_025584-T1
LLU|FUN_025585-T1ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
LLU|FUN_025586-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
LLU|FUN_025587-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
LLU|FUN_025588-T1ALDEHYDE DEHYDROGENASE-RELATED
LLU|FUN_025589-T1
LLU|FUN_025592-T1
LLU|FUN_025593-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_025594-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_025595-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_025596-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_025597-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_025598-T1PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL
LLU|FUN_025599-T1CHOLINE/ETHANOALAMINE KINASE
LLU|FUN_025600-T1
LLU|FUN_025601-T1IODOTHYRONINE DEIODINASE
LLU|FUN_025602-T1IODOTHYRONINE DEIODINASE
LLU|FUN_025603-T1IODOTHYRONINE DEIODINASE
LLU|FUN_025604-T1IODOTHYRONINE DEIODINASE
LLU|FUN_025605-T1
LLU|FUN_025606-T1
LLU|FUN_025607-T1
LLU|FUN_025608-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_025609-T1
LLU|FUN_025610-T1
LLU|FUN_025611-T1
LLU|FUN_025612-T1
LLU|FUN_025613-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_025614-T1
LLU|FUN_025615-T1NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1
LLU|FUN_025616-T1SD08549P
LLU|FUN_025617-T1TREHALOSE-6-PHOSPHATE SYNTHASE
LLU|FUN_025618-T1
LLU|FUN_025619-T1
LLU|FUN_025620-T1
LLU|FUN_025621-T1
LLU|FUN_025623-T1
LLU|FUN_025624-T1
LLU|FUN_025625-T1
LLU|FUN_025626-T1
LLU|FUN_025627-T1
LLU|FUN_025628-T1
LLU|FUN_025629-T1
LLU|FUN_025630-T1
LLU|FUN_025631-T1
LLU|FUN_025632-T1MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED
LLU|FUN_025633-T1ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
LLU|FUN_025634-T1
LLU|FUN_025635-T1BCL-2-LIKE PROTEIN 13
LLU|FUN_025636-T1
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