About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_025534-T1HOMEOBOX PROTEIN BARH-LIKE
LLU|FUN_025535-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_025536-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_025537-T1-
LLU|FUN_025538-T1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
LLU|FUN_025539-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_025540-T1
LLU|FUN_025541-T1
LLU|FUN_025542-T1
LLU|FUN_025543-T1
LLU|FUN_025544-T1YNEIN REGULATORY COMPLEX SUBUNIT 5
LLU|FUN_025545-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_025546-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_025547-T1
LLU|FUN_025548-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_025549-T1
LLU|FUN_025550-T1
LLU|FUN_025551-T1
LLU|FUN_025552-T1
LLU|FUN_025553-T1
LLU|FUN_025554-T1
LLU|FUN_025555-T1
LLU|FUN_025556-T1
LLU|FUN_025557-T1
LLU|FUN_025558-T1
LLU|FUN_025559-T1
LLU|FUN_025560-T1
LLU|FUN_025561-T1
LLU|FUN_025562-T1TIMELESS INTERACTING-RELATED
LLU|FUN_025563-T1ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34
LLU|FUN_025564-T1RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
LLU|FUN_025565-T160S RIBOSOMAL PROTEIN L24
LLU|FUN_025566-T1HEAVYWEIGHT, ISOFORM A
LLU|FUN_025567-T1TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2
LLU|FUN_025568-T1
LLU|FUN_025569-T1MOLTING PROTEIN MLT-4
LLU|FUN_025570-T1SMALL EDRK-RICH FACTOR 1
LLU|FUN_025571-T1SURVIVAL MOTOR NEURON-LIKE PROTEIN 1
LLU|FUN_025572-T1ARGININE/SERINE RICH SPLICING FACTOR SF4/14
LLU|FUN_025573-T1MITOCHONDRIAL RIBOSOMAL PROTEIN L24
LLU|FUN_025574-T1ADENOSINE KINASE
LLU|FUN_025575-T1
LLU|FUN_025576-T1
LLU|FUN_025577-T1
LLU|FUN_025578-T1
LLU|FUN_025579-T1RIIA DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_025580-T1
LLU|FUN_025581-T1
LLU|FUN_025582-T1
LLU|FUN_025583-T1
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