About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_54715-0.9ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_5472-0.8PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_54723-0.1
Bpl_scaf_54723-0.16UNCHARACTERIZED
Bpl_scaf_54723-0.17
Bpl_scaf_54723-0.18MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1
Bpl_scaf_54736-0.1
Bpl_scaf_54736-0.13
Bpl_scaf_54736-0.24
Bpl_scaf_54736-0.25
Bpl_scaf_54736-0.26
Bpl_scaf_54736-0.27
Bpl_scaf_54736-0.3
Bpl_scaf_54736-0.4
Bpl_scaf_54751-0.14METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_54751-0.15
Bpl_scaf_54751-0.18UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Bpl_scaf_54762-0.18
Bpl_scaf_54762-0.19APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_54762-0.9
Bpl_scaf_5477-0.4
Bpl_scaf_5477-0.6D-DOPACHROME DECARBOXYLASE
Bpl_scaf_5477-1.15ROLLING PEBBLES, ISOFORM B
Bpl_scaf_5477-1.17EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_54774-0.17
Bpl_scaf_54774-0.18TYROSINASE FAMILY MEMBER
Bpl_scaf_54774-0.23VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25
Bpl_scaf_54774-0.24LOC100145250 PROTEIN
Bpl_scaf_54774-0.26
Bpl_scaf_54774-0.4
Bpl_scaf_5478-0.2UNCHARACTERIZED
Bpl_scaf_5478-1.5
Bpl_scaf_5478-1.6
Bpl_scaf_5478-1.8CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Bpl_scaf_5478-2.11SOLUTE CARRIER FAMILY 5
Bpl_scaf_5478-2.7GATA ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_5478-2.9SERINE HYDROXYMETHYLTRANSFERASE
Bpl_scaf_54789-0.15
Bpl_scaf_54789-0.20ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_54789-0.21MITOCHONDRIA-EATING PROTEIN-RELATED
Bpl_scaf_54789-0.53
Bpl_scaf_54789-0.56UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT
Bpl_scaf_54789-0.57
Bpl_scaf_54795-0.13
Bpl_scaf_54795-0.14
Bpl_scaf_54795-0.15
Bpl_scaf_54796-0.14SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_54796-0.3
Bpl_scaf_54796-0.4SCAVENGER RECEPTOR DOMAIN-CONTAINING
Bpl_scaf_54796-0.6KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
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