About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_54651-5.18UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_54651-5.40CALPONIN
Bpl_scaf_54657-0.4TOLL-LIKE RECEPTOR
Bpl_scaf_54665-0.1
Bpl_scaf_54665-0.2
Bpl_scaf_54665-1.7
Bpl_scaf_54665-10.10
Bpl_scaf_54665-10.1160S RIBOSOMAL PROTEIN L18
Bpl_scaf_54665-11.11NUCLEOSIDE DIPHOSPHATE KINASE
Bpl_scaf_54665-11.12SPHINGOSINE KINASE
Bpl_scaf_54665-11.8FAS-BINDING FACTOR 1
Bpl_scaf_54665-12.10NUCLEOLAR PROTEIN 12
Bpl_scaf_54665-12.1460S RIBOSOMAL PROTEIN L34
Bpl_scaf_54665-12.3
Bpl_scaf_54665-12.9VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
Bpl_scaf_54665-14.11GUANYLYL CYCLASE
Bpl_scaf_54665-14.26GUANYLYL CYCLASE
Bpl_scaf_54665-2.10
Bpl_scaf_54665-2.6SECERNIN
Bpl_scaf_54665-3.13
Bpl_scaf_54665-3.3
Bpl_scaf_54665-3.5
Bpl_scaf_54665-3.7RNA BINDING PROTEIN
Bpl_scaf_54665-4.13
Bpl_scaf_54665-4.17
Bpl_scaf_54665-4.18
Bpl_scaf_54665-4.3
Bpl_scaf_54665-4.4
Bpl_scaf_54665-6.0LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_54665-8.8
Bpl_scaf_54665-9.4
Bpl_scaf_54665-9.5N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_54677-0.11STABILIN
Bpl_scaf_54677-0.13
Bpl_scaf_54677-0.17MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2
Bpl_scaf_54677-0.18MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2
Bpl_scaf_54677-0.3
Bpl_scaf_54699-0.12
Bpl_scaf_54699-0.7BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
Bpl_scaf_5470-1.18TYROSINASE FAMILY MEMBER
Bpl_scaf_5470-1.20LONGEVITY ASSURANCE FACTOR 1 LAG1
Bpl_scaf_5470-1.22
Bpl_scaf_5470-1.23
Bpl_scaf_5470-1.3
Bpl_scaf_5470-1.7
Bpl_scaf_5470-1.8
Bpl_scaf_54709-0.8
Bpl_scaf_54715-0.3
Bpl_scaf_54715-0.6
Bpl_scaf_54715-0.8RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED
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