About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_54291-1.24METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_54300-1.10D123 PROTEIN
Bpl_scaf_54300-1.11UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_54300-1.30MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Bpl_scaf_54300-1.31ARP2/3 COMPLEX 20 KD SUBUNIT
Bpl_scaf_54300-1.9
Bpl_scaf_54305-0.0
Bpl_scaf_54307-0.4
Bpl_scaf_54310-0.7SH3 DOMAIN-CONTAINING
Bpl_scaf_54310-0.8
Bpl_scaf_54310-1.17WD REPEAT DOMAIN-CONTAINING FAMILY
Bpl_scaf_54310-1.22
Bpl_scaf_54310-1.24HEH2P
Bpl_scaf_54310-1.4BONUS, ISOFORM C-RELATED
Bpl_scaf_54319-0.1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_54321-0.4FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_54321-1.4
Bpl_scaf_54321-2.10
Bpl_scaf_54321-2.11SOLUTE CARRIER FAMILY 40 MEMBER
Bpl_scaf_54321-2.14
Bpl_scaf_54321-2.19CADHERIN-87A
Bpl_scaf_54321-2.22SOLUTE CARRIER FAMILY 17
Bpl_scaf_54338-0.0
Bpl_scaf_54340-0.11SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_54340-0.19
Bpl_scaf_54340-0.3SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_54340-0.9
Bpl_scaf_54340-1.6
Bpl_scaf_54340-2.10SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_54340-2.12TOLL-LIKE RECEPTOR
Bpl_scaf_54340-2.14THREE PRIME REPAIR EXONUCLEASE 1, 2
Bpl_scaf_54340-2.29TOLL-LIKE RECEPTOR
Bpl_scaf_54340-2.30
Bpl_scaf_54352-0.12
Bpl_scaf_54352-1.11HEH2P
Bpl_scaf_54352-1.3
Bpl_scaf_54352-2.11
Bpl_scaf_54352-2.19SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_54352-2.2
Bpl_scaf_54367-0.7SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_54368-0.1
Bpl_scaf_54368-0.3
Bpl_scaf_54374-1.7SEPTIN
Bpl_scaf_54374-2.14CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Bpl_scaf_54374-2.17
Bpl_scaf_54374-2.25
Bpl_scaf_54374-2.26
Bpl_scaf_54374-2.27OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Bpl_scaf_54374-2.28
Bpl_scaf_54374-2.29NOTUM-RELATED
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