About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_53983-0.1
Bpl_scaf_53983-0.2
Bpl_scaf_53983-0.3
Bpl_scaf_53983-0.5
Bpl_scaf_53985-0.4
Bpl_scaf_53995-0.10
Bpl_scaf_53995-0.11
Bpl_scaf_540-0.0CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_5400-0.17
Bpl_scaf_5400-0.18MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_5400-0.20
Bpl_scaf_5400-0.30CEREBELLIN-RELATED
Bpl_scaf_5400-0.32
Bpl_scaf_54008-0.0
Bpl_scaf_54008-0.11NONSYNDROMIC HEARING IMPAIRMENT PROTEIN
Bpl_scaf_54017-0.0
Bpl_scaf_54017-0.1
Bpl_scaf_54026-0.0
Bpl_scaf_54034-0.1
Bpl_scaf_54034-1.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_54034-10.10
Bpl_scaf_54034-10.8
Bpl_scaf_54034-11.1CALPAIN
Bpl_scaf_54034-12.12CENTROSOMAL PROTEIN OF 55 KDA
Bpl_scaf_54034-12.14COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Bpl_scaf_54034-13.10CASEIN KINASE-RELATED
Bpl_scaf_54034-13.7MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_54034-13.9PROTEIN SERAC1
Bpl_scaf_54034-2.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_54034-2.5
Bpl_scaf_54034-2.9G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_54034-3.1TBC1 DOMAIN FAMILY MEMBER 19
Bpl_scaf_54034-4.13
Bpl_scaf_54034-4.14
Bpl_scaf_54034-4.5
Bpl_scaf_54034-5.14UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_54034-5.6ADDUCIN
Bpl_scaf_54034-7.3ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_54034-9.4DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_54034-9.8CARBONIC ANHYDRASE
Bpl_scaf_54045-0.7REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Bpl_scaf_54045-0.8PROTEIN CBG17840
Bpl_scaf_54046-0.12
Bpl_scaf_54046-0.2PR DOMAIN ZINC FINGER PROTEIN
Bpl_scaf_54046-1.11TATA-BOX BINDING PROTEIN
Bpl_scaf_54046-1.2
Bpl_scaf_54046-2.9PROTEASOME SUBUNIT ALPHA/BETA
Bpl_scaf_54046-3.3MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Bpl_scaf_54046-3.5SOLUTE CARRIER FAMILY 35 MEMBER B
Bpl_scaf_54046-5.14MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN
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