About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_53786-2.25CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Bpl_scaf_53786-2.26GPI TRANSAMIDASE COMPONENT PIG-U
Bpl_scaf_53786-2.3CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Bpl_scaf_53786-3.10MULTIDRUG RESISTANCE PROTEIN
Bpl_scaf_53786-3.11DNA REPAIR/RNA PROCESSING CPSF FAMILY
Bpl_scaf_53795-0.3
Bpl_scaf_53797-0.6
Bpl_scaf_53797-0.9MYOGENIC FACTOR
Bpl_scaf_53797-2.1NERVE GROWTH FACTOR NGF -RELATED
Bpl_scaf_53797-2.2
Bpl_scaf_53797-2.3
Bpl_scaf_53797-3.1INHIBITOR OF APOPTOSIS
Bpl_scaf_53797-3.3COLLAGEN ALPHA
Bpl_scaf_53802-0.3
Bpl_scaf_53803-0.2ANKYRIN REPEAT PROTEIN
Bpl_scaf_53804-0.3
Bpl_scaf_53807-0.11
Bpl_scaf_53807-0.13
Bpl_scaf_53807-0.9KREMEN PROTEIN
Bpl_scaf_53807-1.12APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_53807-1.9
Bpl_scaf_53807-2.6
Bpl_scaf_53807-3.12
Bpl_scaf_53807-3.18
Bpl_scaf_53809-0.4
Bpl_scaf_53810-0.0
Bpl_scaf_53812-0.10VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_53813-0.0
Bpl_scaf_53813-0.3
Bpl_scaf_53813-0.4
Bpl_scaf_53814-0.0
Bpl_scaf_53814-0.3
Bpl_scaf_53817-0.0
Bpl_scaf_53817-0.10
Bpl_scaf_53817-0.9
Bpl_scaf_53818-0.3DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
Bpl_scaf_53818-1.3
Bpl_scaf_53818-2.20SOLUTE CARRIER FAMILY 17
Bpl_scaf_53818-3.12PROTEASOME SUBUNIT ALPHA/BETA
Bpl_scaf_53818-3.14MYD88
Bpl_scaf_53818-3.16
Bpl_scaf_53818-3.18
Bpl_scaf_53818-3.22GLUTATHIONE PEROXIDASE
Bpl_scaf_53818-3.23
Bpl_scaf_53818-3.8TIPA
Bpl_scaf_53835-0.0
Bpl_scaf_53835-0.3MYOTROPHIN
Bpl_scaf_5384-0.2HISTIDINE-RICH GLYCOPROTEIN
Bpl_scaf_5384-0.8PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Bpl_scaf_53846-0.3WASH COMPLEX SUBUNIT 5
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