About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_5334-3.0
Bpl_scaf_5334-3.2LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Bpl_scaf_5334-3.5APOSPORY-ASSOCIATED PROTEIN C-RELATED
Bpl_scaf_5334-4.13
Bpl_scaf_5334-4.14DNA HELICASE-RELATED
Bpl_scaf_5334-4.15DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_5334-4.30
Bpl_scaf_5334-4.32SOLUTE CARRIER FAMILY 17
Bpl_scaf_5334-4.34
Bpl_scaf_5334-5.6GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_5334-6.3CARBONIC ANHYDRASE
Bpl_scaf_5334-6.9ACYL-COA DEHYDROGENASE
Bpl_scaf_53350-0.4
Bpl_scaf_53363-0.0
Bpl_scaf_53363-0.6
Bpl_scaf_53367-0.0
Bpl_scaf_53367-0.3TOLL-LIKE RECEPTOR
Bpl_scaf_53367-0.4TOLL-LIKE RECEPTOR
Bpl_scaf_53367-0.5TOLL-LIKE RECEPTOR
Bpl_scaf_53367-0.7SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_53367-0.8TOLL-LIKE RECEPTOR
Bpl_scaf_53375-0.5LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_5339-0.5ADHESION G PROTEIN-COUPLED RECEPTOR G7
Bpl_scaf_53390-0.0
Bpl_scaf_53390-0.6
Bpl_scaf_53397-0.13SIDESTEP PROTEIN
Bpl_scaf_53397-0.14
Bpl_scaf_53397-0.15
Bpl_scaf_53397-0.8
Bpl_scaf_53397-0.9PROTEIN SIDEKICK
Bpl_scaf_53407-0.7
Bpl_scaf_53407-0.9RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_53429-0.11
Bpl_scaf_53430-0.11
Bpl_scaf_53430-0.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_53430-0.7ADENINE DNA GLYCOSYLASE
Bpl_scaf_53430-1.0ALPHA-PROTEIN KINASE VWKA
Bpl_scaf_53430-2.9PROTEIN SIDEKICK
Bpl_scaf_53430-3.6
Bpl_scaf_53430-3.8
Bpl_scaf_53430-4.3SULFITE REDUCTASE
Bpl_scaf_53430-5.25
Bpl_scaf_53430-5.26SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT
Bpl_scaf_53430-5.28METALLOPEPTIDASE M28 FAMILY MEMBER
Bpl_scaf_53430-5.29PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Bpl_scaf_53433-0.11BONUS, ISOFORM C-RELATED
Bpl_scaf_53433-0.9BONUS, ISOFORM C-RELATED
Bpl_scaf_53447-0.23GUANYLYL CYCLASE
Bpl_scaf_53462-0.5
Bpl_scaf_53462-0.7ENDONUCLEASE-RELATED
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