About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_52995-2.10BETA-MICROSEMINOPROTEIN
Bpl_scaf_52995-2.11EPSIN/ENT-RELATED
Bpl_scaf_52995-3.11ATP-DEPENDENT DNA HELICASE
Bpl_scaf_52995-3.3TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_52995-3.4MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Bpl_scaf_5300-0.0
Bpl_scaf_5300-0.1
Bpl_scaf_5300-0.10
Bpl_scaf_5300-0.2
Bpl_scaf_5300-0.20
Bpl_scaf_5300-0.27CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_5300-0.3
Bpl_scaf_5300-0.4
Bpl_scaf_5300-0.5
Bpl_scaf_5300-0.6
Bpl_scaf_5300-0.8
Bpl_scaf_5300-0.9
Bpl_scaf_53107-0.3MYOINOSITOL OXYGENASE
Bpl_scaf_53107-0.52-HYDROXYACID DEHYDROGENASE-RELATED
Bpl_scaf_53107-0.6BAX INHIBITOR-RELATED
Bpl_scaf_53107-1.19
Bpl_scaf_53107-1.7
Bpl_scaf_53107-1.8CYTOKINE RECEPTOR
Bpl_scaf_53107-2.5
Bpl_scaf_53107-2.6FATTY ACID DESATURASE 2
Bpl_scaf_53107-2.7
Bpl_scaf_53107-2.8
Bpl_scaf_53107-5.2ZINC FINGER-CONTAINING PROTEIN P48ZNF
Bpl_scaf_53107-6.1
Bpl_scaf_53107-6.7
Bpl_scaf_53107-7.6ANION EXCHANGE PROTEIN
Bpl_scaf_53107-7.7ANION EXCHANGE PROTEIN
Bpl_scaf_53108-0.4LYSINE-SPECIFIC DEMETHYLASE
Bpl_scaf_53108-0.5TYROSINE-PROTEIN KINASE
Bpl_scaf_53108-1.12RAB6A-GEF COMPLEX PARTNER PROTEIN 1
Bpl_scaf_53108-2.19UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_53108-2.3BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_53108-3.11BREAST CANCER METASTASIS-SUPPRESSOR 1
Bpl_scaf_53108-3.12-
Bpl_scaf_53108-3.13DER1-LIKE PROTEIN, DERLIN
Bpl_scaf_53108-4.11UNC-93 RELATED
Bpl_scaf_53108-4.12NEP1/MRA1
Bpl_scaf_53108-4.13
Bpl_scaf_53108-4.19UNC-93 RELATED
Bpl_scaf_53108-5.10
Bpl_scaf_53108-5.8PHOSPHONATES-BINDING PERIPLASMIC PROTEIN
Bpl_scaf_53108-5.9MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1
Bpl_scaf_53108-6.23
Bpl_scaf_53108-6.24TRNA (URACIL-5-)-METHYLTRANSFERASE
Bpl_scaf_53108-6.25CLATHRIN HEAVY CHAIN RELATED
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