About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_52916-0.2DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_52918-0.0
Bpl_scaf_52918-0.10
Bpl_scaf_52918-0.11UNCHARACTERIZED
Bpl_scaf_52918-0.8
Bpl_scaf_52918-0.9
Bpl_scaf_52918-1.2
Bpl_scaf_52918-1.21
Bpl_scaf_52918-1.22
Bpl_scaf_52918-1.23
Bpl_scaf_52918-1.25UNCHARACTERIZED
Bpl_scaf_52918-1.27
Bpl_scaf_52918-1.28
Bpl_scaf_52918-1.3
Bpl_scaf_52918-1.5
Bpl_scaf_52922-0.0
Bpl_scaf_52927-0.11
Bpl_scaf_52927-1.15FORKHEAD BOX PROTEIN
Bpl_scaf_52927-1.16
Bpl_scaf_52927-1.19PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE
Bpl_scaf_52927-1.22ARM REPEAT SUPERFAMILY PROTEIN
Bpl_scaf_52927-1.52UNCHARACTERIZED
Bpl_scaf_52927-1.54ZINC FINGER PROTEIN 142
Bpl_scaf_52927-1.55
Bpl_scaf_52927-1.56
Bpl_scaf_52932-0.7PUTATIVE-RELATED
Bpl_scaf_52937-0.3
Bpl_scaf_5294-0.7
Bpl_scaf_52941-0.17
Bpl_scaf_52941-0.2SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_52941-0.4
Bpl_scaf_52941-1.7PLASMINOGEN-RELATED
Bpl_scaf_52941-2.13
Bpl_scaf_52941-2.14
Bpl_scaf_52941-2.16PLASMINOGEN-RELATED
Bpl_scaf_52941-2.6
Bpl_scaf_52941-2.9
Bpl_scaf_52947-0.0
Bpl_scaf_5295-0.15IST1 FAMILY MEMBER
Bpl_scaf_5295-0.16
Bpl_scaf_5295-0.3
Bpl_scaf_5295-0.5CALCIUM BINDING PROTEIN
Bpl_scaf_5295-1.6PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_5295-1.8PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_5295-2.5INHIBITOR OF APOPTOSIS
Bpl_scaf_5295-4.10SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_5295-4.2UNCHARACTERIZED
Bpl_scaf_5295-4.9ZGC:195170
Bpl_scaf_5295-5.4ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
Bpl_scaf_5295-5.5HISTIDINE TRIAD HIT PROTEIN
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