About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_52426-0.1
Bpl_scaf_52446-0.10
Bpl_scaf_52446-0.14
Bpl_scaf_52446-0.5
Bpl_scaf_52461-0.3SCAVENGER RECEPTOR CLASS F
Bpl_scaf_52474-0.0
Bpl_scaf_5248-0.15ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_5248-0.3ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_5248-0.6ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_5248-1.6NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_5248-1.7SULFATE TRANSPORTER
Bpl_scaf_5248-2.0
Bpl_scaf_5248-2.460S RIBOSOMAL PROTEIN L31
Bpl_scaf_5248-3.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_5248-4.6
Bpl_scaf_5248-4.7SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_5248-5.0
Bpl_scaf_5248-5.26
Bpl_scaf_5248-5.30MACROGLOBULIN / COMPLEMENT
Bpl_scaf_5248-5.31MACROGLOBULIN / COMPLEMENT
Bpl_scaf_5248-5.32
Bpl_scaf_52494-0.0
Bpl_scaf_52494-0.6MACROGLOBULIN / COMPLEMENT
Bpl_scaf_52516-0.0
Bpl_scaf_52516-0.1
Bpl_scaf_52526-0.3REGUCALCIN
Bpl_scaf_52539-0.1TRANSMEMBRANE PROTEIN 246
Bpl_scaf_52539-0.7ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_52550-0.5MOLTING PROTEIN MLT-4
Bpl_scaf_52550-0.8FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_52550-0.9FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_52562-0.5
Bpl_scaf_52562-0.6
Bpl_scaf_52576-0.6FATTY ACID SYNTHASE
Bpl_scaf_52588-0.1
Bpl_scaf_52588-0.2
Bpl_scaf_52603-0.6TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Bpl_scaf_52620-0.8
Bpl_scaf_5264-0.11SELENOPROTEIN O
Bpl_scaf_5264-0.12
Bpl_scaf_52650-0.10ACYL-COA THIOESTERASE
Bpl_scaf_52650-0.8COILED-COIL DOMAIN-CONTAINING PROTEIN 15
Bpl_scaf_52659-0.12
Bpl_scaf_52659-0.6
Bpl_scaf_52660-0.3
Bpl_scaf_52660-1.2CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
Bpl_scaf_52660-3.29TPR REPEAT CONTAINING PROTEIN
Bpl_scaf_52660-3.5
Bpl_scaf_52660-3.6PROPERDIN
Bpl_scaf_52660-4.11ARRESTIN DOMAIN CONTAINING PROTEIN
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