About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_52189-7.9RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_52190-0.0BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_52195-0.5
Bpl_scaf_52195-0.8MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED
Bpl_scaf_52195-0.9CHYMOTRYPSIN-RELATED
Bpl_scaf_52195-1.20POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_52195-1.27
Bpl_scaf_52195-1.31
Bpl_scaf_52195-1.32
Bpl_scaf_52195-1.33ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_52195-1.35
Bpl_scaf_522-0.6
Bpl_scaf_522-0.7
Bpl_scaf_5220-0.4PERFORIN-LIKE PROTEIN 1
Bpl_scaf_52204-0.2ADHESION G-PROTEIN COUPLED RECEPTOR V1
Bpl_scaf_52204-0.3MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_52204-1.0
Bpl_scaf_52204-1.10ADHESION G-PROTEIN COUPLED RECEPTOR V1
Bpl_scaf_52204-1.12ADHESION G-PROTEIN COUPLED RECEPTOR V1
Bpl_scaf_52204-1.4DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_52204-1.74.1 G PROTEIN
Bpl_scaf_52204-1.9GLUCONOKINASE-RELATED
Bpl_scaf_52208-0.2
Bpl_scaf_52224-0.3
Bpl_scaf_52224-1.1
Bpl_scaf_52224-1.17
Bpl_scaf_52224-1.19
Bpl_scaf_52224-1.2
Bpl_scaf_52225-0.0
Bpl_scaf_52231-0.0
Bpl_scaf_52234-0.6PROTEIN CBG15099
Bpl_scaf_52241-0.3CONTACTIN 5
Bpl_scaf_52241-1.13CAAX PRENYL PROTEASE 1
Bpl_scaf_52241-1.16BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_52241-1.18INHIBITOR OF APOPTOSIS
Bpl_scaf_52241-1.20CAAX PRENYL PROTEASE 1
Bpl_scaf_52241-1.21BONUS, ISOFORM C-RELATED
Bpl_scaf_52252-0.0
Bpl_scaf_52252-0.5TATA-BOX BINDING PROTEIN
Bpl_scaf_52257-0.0
Bpl_scaf_52257-0.3
Bpl_scaf_52257-1.2
Bpl_scaf_52257-2.5G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_52257-2.6PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_52258-0.1
Bpl_scaf_52259-0.3PHOSPHOLIPASE D
Bpl_scaf_52264-0.1
Bpl_scaf_52269-0.0
Bpl_scaf_52271-1.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_52286-0.10CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
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