About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_51657-10.12-
Bpl_scaf_51657-10.14VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_51657-10.2
Bpl_scaf_51657-2.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_51657-5.4
Bpl_scaf_51657-5.5
Bpl_scaf_51657-6.0
Bpl_scaf_51657-7.2
Bpl_scaf_51657-8.11
Bpl_scaf_51657-8.6
Bpl_scaf_51657-8.7MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Bpl_scaf_51657-9.6
Bpl_scaf_51660-0.2
Bpl_scaf_51661-0.10GAMMA TUBULIN COMPLEX PROTEIN
Bpl_scaf_51661-0.15DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_51661-1.2
Bpl_scaf_51661-2.0
Bpl_scaf_51661-2.10STAR-RELATED LIPID TRANSFER PROTEIN 9
Bpl_scaf_51661-2.9STAR-RELATED LIPID TRANSFER PROTEIN 9
Bpl_scaf_51661-3.10APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_51661-3.5APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_51662-0.2FATTY ACID SYNTHASE
Bpl_scaf_51664-0.8CADHERIN-23
Bpl_scaf_51665-0.0
Bpl_scaf_51669-0.1BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED
Bpl_scaf_51670-0.0
Bpl_scaf_51671-0.11INOSITOL 5-PHOSPHATASE
Bpl_scaf_51671-0.14G PATCH DOMAIN CONTAINING PROTEIN
Bpl_scaf_51671-1.12
Bpl_scaf_51671-1.2SERINE/THREONINE-PROTEIN KINASE PLK
Bpl_scaf_51671-1.5TRANSCRIPTIONAL ADAPTER 3-RELATED
Bpl_scaf_51671-2.0
Bpl_scaf_51671-3.5PDF RECEPTOR-LIKE PROTEIN-RELATED
Bpl_scaf_51672-0.5
Bpl_scaf_51674-0.5CEREBELLIN-RELATED
Bpl_scaf_51675-0.1
Bpl_scaf_51675-0.7METHYLTRANSFERASE, FKBM FAMILY PROTEIN
Bpl_scaf_51676-0.0
Bpl_scaf_51677-0.0
Bpl_scaf_51678-0.8COILED-COIL DOMAIN-CONTAINING PROTEIN 180
Bpl_scaf_5168-0.0
Bpl_scaf_51680-0.4CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_51682-0.330S 40S RIBOSOMAL PROTEIN
Bpl_scaf_51682-2.10
Bpl_scaf_51682-2.12
Bpl_scaf_51682-2.13
Bpl_scaf_51682-2.9
Bpl_scaf_51682-3.12ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Bpl_scaf_51682-3.13ZINC/IRON TRANSPORTER
Bpl_scaf_51682-3.14TESTIS-EXPRESSED PROTEIN 15
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