About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_50919-9.8CELL CYCLE CONTROL PROTEIN 50
Bpl_scaf_50919-9.9CELL CYCLE CONTROL PROTEIN 50
Bpl_scaf_50924-0.2
Bpl_scaf_50925-0.0
Bpl_scaf_50928-0.2
Bpl_scaf_50928-1.3
Bpl_scaf_50928-3.7SCAVENGER RECEPTOR CLASS F
Bpl_scaf_50933-0.3
Bpl_scaf_50939-0.3SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_50939-0.4TROPONIN C-AKIN-1 PROTEIN
Bpl_scaf_50939-1.3
Bpl_scaf_50939-2.7LONGEVITY ASSURANCE FACTOR 1 LAG1
Bpl_scaf_50939-2.8UNCHARACTERIZED
Bpl_scaf_50939-3.10
Bpl_scaf_50939-3.12EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
Bpl_scaf_50941-0.4MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_50943-0.0ACTIN
Bpl_scaf_50943-0.1ACTIN
Bpl_scaf_50944-0.0
Bpl_scaf_50946-0.2DYNACTIN SUBUNIT
Bpl_scaf_50948-0.4IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_50950-0.3
Bpl_scaf_50950-1.16
Bpl_scaf_50950-1.740S RIBOSOMAL PROTEIN SA
Bpl_scaf_50950-1.9N-TERMINAL ASPARAGINE AMIDOHYDROLASE
Bpl_scaf_50950-2.3
Bpl_scaf_50950-2.580 KDA MCM3-ASSOCIATED PROTEIN
Bpl_scaf_50950-3.11CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
Bpl_scaf_50950-3.36CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_50950-3.4
Bpl_scaf_50950-3.60CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_50951-0.0MUCIN 4-RELATED
Bpl_scaf_50952-0.0UNCHARACTERIZED
Bpl_scaf_50956-0.5CEREBELLIN-RELATED
Bpl_scaf_50958-0.7GENE, 32742-RELATED-RELATED
Bpl_scaf_50960-0.1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_50961-1.17
Bpl_scaf_50961-3.17
Bpl_scaf_50967-0.1GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_50977-0.0
Bpl_scaf_50977-0.4
Bpl_scaf_50987-0.537S RIBOSOMAL PROTEIN S22
Bpl_scaf_50990-0.2PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_51003-0.1
Bpl_scaf_51028-0.0RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_51039-0.1
Bpl_scaf_51039-1.2
Bpl_scaf_51039-4.1CARBOXYLESTERASE
Bpl_scaf_51040-0.4
Bpl_scaf_51049-0.3FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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