About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_51214-0.12ANKYRIN REPEAT-CONTAINING
Bpl_scaf_51214-0.13DYMECLIN
Bpl_scaf_51215-0.6RHO-TYPE GTPASE ACTIVATING PROTEIN
Bpl_scaf_51215-2.11ARMADILLO REPEAT-CONTAINING PROTEIN 3
Bpl_scaf_51215-2.6BONUS, ISOFORM C-RELATED
Bpl_scaf_51215-4.4BONUS, ISOFORM C-RELATED
Bpl_scaf_51215-4.6CARBONIC ANHYDRASE
Bpl_scaf_51215-5.3UNCHARACTERIZED
Bpl_scaf_51215-5.6
Bpl_scaf_51215-5.7
Bpl_scaf_51219-0.7MUCIN 4-RELATED
Bpl_scaf_51229-0.0
Bpl_scaf_51238-0.5TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_51249-0.1
Bpl_scaf_51249-0.11
Bpl_scaf_51249-0.15
Bpl_scaf_51249-0.4THAP DOMAIN PROTEIN
Bpl_scaf_51258-0.1
Bpl_scaf_51258-0.7GTP-BINDING
Bpl_scaf_5126-0.0LEUCINE ZIPPER CONTAINING TRANSCRIPTION FACTOR LZF1
Bpl_scaf_51268-0.1PROTEIN CBG10425
Bpl_scaf_51268-0.6
Bpl_scaf_51268-0.9AP ENDONUCLEASE
Bpl_scaf_51270-0.2
Bpl_scaf_51270-0.7
Bpl_scaf_51279-0.25
Bpl_scaf_51279-0.26
Bpl_scaf_51279-0.27
Bpl_scaf_51279-0.6
Bpl_scaf_51279-0.8
Bpl_scaf_51284-0.22IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_51284-0.24
Bpl_scaf_51284-0.25
Bpl_scaf_51284-0.7
Bpl_scaf_51293-0.10GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Bpl_scaf_51293-0.11TUDOR DOMAIN CONTAINING PROTEIN
Bpl_scaf_51293-0.20
Bpl_scaf_51293-0.8ARGININE OR CREATINE KINASE
Bpl_scaf_51316-0.0G-PROTEIN COUPLED RECEPTOR 158-RELATED
Bpl_scaf_51316-0.1
Bpl_scaf_51325-0.29CYTOKINE RECEPTOR
Bpl_scaf_51325-0.30
Bpl_scaf_51325-0.31
Bpl_scaf_51325-0.35
Bpl_scaf_51336-0.21
Bpl_scaf_51336-0.22AGAP001331-PA-RELATED
Bpl_scaf_51336-0.23UNCHARACTERIZED
Bpl_scaf_51345-0.0
Bpl_scaf_51345-0.12SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_51345-0.17PR DOMAIN ZINC FINGER PROTEIN
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