About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

<< First 444 445 446 447 448 449 450 451 452 453 Forward> Last>>        672 pages in total

Gene IDDescription
Bpl_scaf_50876-8.5HEAT SHOCK 70 KDA PROTEIN 14
Bpl_scaf_50876-9.2PROTEIN VAV
Bpl_scaf_50880-0.4PERIOSTIN-RELATED
Bpl_scaf_50883-0.3
Bpl_scaf_50886-0.2
Bpl_scaf_50886-1.10STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
Bpl_scaf_50886-1.3STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
Bpl_scaf_50886-1.4
Bpl_scaf_50886-1.9ANGIOTENSIN-CONVERTING ENZYME
Bpl_scaf_50886-2.14
Bpl_scaf_50886-2.15OXIDOREDUCTASE, SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY (AFU_ORTHOLOGUE AFUA_5G02870)
Bpl_scaf_50886-2.162,5-DIKETO-D-GLUCONIC ACID REDUCTASE
Bpl_scaf_50886-2.17
Bpl_scaf_50887-0.12CALCIUM BINDING PROTEINS
Bpl_scaf_50887-0.7DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Bpl_scaf_50887-1.0SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2
Bpl_scaf_50887-10.11BONUS, ISOFORM C-RELATED
Bpl_scaf_50887-10.21THIOREDOXIN
Bpl_scaf_50887-10.30RADICAL SAM PROTEINS
Bpl_scaf_50887-10.31SARM1
Bpl_scaf_50887-10.32AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN
Bpl_scaf_50887-10.33DNA REPAIR ENDONUCLEASE XPF
Bpl_scaf_50887-10.34HERMANSKY-PUDLAK SYNDROME 6 PROTEIN
Bpl_scaf_50887-2.10ENVOPLAKIN
Bpl_scaf_50887-3.9NUCLEAR FACTOR I
Bpl_scaf_50887-4.6PEROXISOMAL MEMBRANE PROTEIN PEX13
Bpl_scaf_50887-4.7PALMITOYLTRANSFERASE ZDHHC16
Bpl_scaf_50887-5.11
Bpl_scaf_50887-5.7RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_50887-6.11DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1
Bpl_scaf_50887-6.12HISTONE ACETYLTRANSFERASE-RELATED
Bpl_scaf_50887-6.24ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
Bpl_scaf_50887-6.25ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
Bpl_scaf_50887-7.3
Bpl_scaf_50887-7.4
Bpl_scaf_50887-8.25CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN
Bpl_scaf_50887-8.36PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
Bpl_scaf_50887-9.10LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Bpl_scaf_50887-9.4
Bpl_scaf_50913-0.15GAF/PUTATIVE CYTOSKELETAL PROTEIN
Bpl_scaf_50913-0.8EH DOMAIN
Bpl_scaf_50913-0.9QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1
Bpl_scaf_50913-1.2WD REPEAT DOMAIN-CONTAINING FAMILY
Bpl_scaf_50913-2.12TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_50913-2.13EPH RECEPTOR A5
Bpl_scaf_50913-2.8GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
Bpl_scaf_50913-3.3BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_50914-0.5ANGIOTENSIN-CONVERTING ENZYME
Bpl_scaf_50915-0.1
Bpl_scaf_50915-0.4DNA2/NAM7 HELICASE FAMILY
TOP